Gene: Hps6 (HPS6, biogenesis of lysosomal organelles complex 2 subunit 3) Rattus norvegicus
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Symbol: Hps6
Name: HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
Description: ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); Rab GTPase binding (ortholog); INVOLVED IN blood coagulation (ortholog); lysosome localization (ortholog); melanocyte differentiation (ortholog); ASSOCIATED WITH Hermanski-Pudlak Syndrome (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak Syndrome 6 (ortholog); FOUND IN BLOC-2 complex (ortholog); lysosomal membrane (ortholog); membrane (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,3-dinitrobenzene; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Hermansky-Pudlak syndrome 6; hermansky-Pudlak syndrome 6 protein homolog; Hsp6; MGC93064; ru; ruby-eye protein homolog; ruby-eye-like protein
Orthologs:
Allele / Splice: Hps6m1Mcwi  
Genetic Models: SS-Hps6m1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01265,761,818 - 265,764,427 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01273,191,755 - 273,194,364 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41251,226,344 - 251,228,953 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11251,486,912 - 251,489,521 (+)NCBI
Celera1240,659,828 - 240,662,437 (+)NCBICelera
Cytogenetic Map1q54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hps6
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 631341
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE