Septin3 (septin 3) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Septin3 (septin 3) Rattus norvegicus
Analyze
Symbol: Septin3
Name: septin 3
RGD ID: 621745
Description: Enables GTP binding activity. Predicted to be involved in cytoskeleton-dependent cytokinesis. Located in presynaptic cytoskeleton and presynaptic membrane. Is active in presynapse. Orthologous to human SEPTIN3 (septin 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dibromophenyl 2,4,5-tribromophenyl ether; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: G-septin alpha; neuronal-specific septin-3; P40; Sep3; Sept3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87115,659,414 - 115,691,173 (+)NCBIGRCr8
mRatBN7.27113,783,217 - 113,811,089 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7113,783,095 - 113,811,087 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7115,545,644 - 115,566,998 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07117,769,160 - 117,790,514 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07117,738,608 - 117,759,964 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07123,506,535 - 123,526,542 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,510,804 - 123,526,542 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07123,491,254 - 123,511,261 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,650,069 - 120,669,466 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17120,684,297 - 120,703,696 (+)NCBI
Celera7110,104,873 - 110,124,400 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cell division site  (IBA,IEA)
microtubule cytoskeleton  (IBA,IEA)
presynapse  (IDA,ISO)
presynaptic cytoskeleton  (IBA,IDA,IEA)
presynaptic membrane  (IDA)
septin complex  (IBA,IEA,ISO,ISS)
septin ring  (IBA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Biochemical characterization of membrane-associated septin from rat brain. Maimaitiyiming M, etal., J Neurochem. 2008 Aug;106(3):1175-83. Epub 2008 May 3.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Phosphorylation of septin 3 on Ser-91 by cGMP-dependent protein kinase-I in nerve terminals. Xue J, etal., Biochem J. 2004 Aug 1;381(Pt 3):753-60.
7. Phosphorylation of a new brain-specific septin, G-septin, by cGMP-dependent protein kinase. Xue J, etal., J Biol Chem 2000 Apr 7;275(14):10047-56.
8. Septin 3 (G-septin) is a developmentally regulated phosphoprotein enriched in presynaptic nerve terminals. Xue J, etal., J Neurochem. 2004 Nov;91(3):579-90.
Additional References at PubMed
PMID:18809578   PMID:22871113   PMID:25416956   PMID:29476059  


Genomics

Comparative Map Data
Septin3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87115,659,414 - 115,691,173 (+)NCBIGRCr8
mRatBN7.27113,783,217 - 113,811,089 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7113,783,095 - 113,811,087 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7115,545,644 - 115,566,998 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07117,769,160 - 117,790,514 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07117,738,608 - 117,759,964 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07123,506,535 - 123,526,542 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,510,804 - 123,526,542 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07123,491,254 - 123,511,261 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,650,069 - 120,669,466 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17120,684,297 - 120,703,696 (+)NCBI
Celera7110,104,873 - 110,124,400 (+)NCBICelera
Cytogenetic Map7q34NCBI
SEPTIN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382241,969,443 - 41,998,221 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2241,969,443 - 41,998,221 (+)EnsemblGRCh38hg38GRCh38
GRCh372242,365,447 - 42,394,225 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362240,702,877 - 40,724,171 (+)NCBINCBI36Build 36hg18NCBI36
Build 342240,697,495 - 40,718,570NCBI
Celera2226,179,152 - 26,200,449 (+)NCBICelera
Cytogenetic Map22q13.2NCBI
HuRef2225,339,389 - 25,360,426 (+)NCBIHuRef
CHM1_12242,333,143 - 42,354,415 (+)NCBICHM1_1
T2T-CHM13v2.02242,449,051 - 42,477,828 (+)NCBIT2T-CHM13v2.0
Septin3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391582,153,003 - 82,178,775 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1582,153,003 - 82,178,775 (+)EnsemblGRCm39 Ensembl
GRCm381582,268,802 - 82,294,574 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1582,268,802 - 82,294,574 (+)EnsemblGRCm38mm10GRCm38
MGSCv371582,105,365 - 82,124,872 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361582,102,657 - 82,119,825 (+)NCBIMGSCv36mm8
Celera1584,399,152 - 84,418,538 (+)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1538.56NCBI
Septin3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541327,381,103 - 27,400,899 (+)NCBIChiLan1.0ChiLan1.0
SEPTIN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22351,788,767 - 51,827,843 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12254,487,960 - 54,527,047 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02222,860,671 - 22,890,643 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12240,953,369 - 40,974,210 (+)NCBIpanpan1.1PanPan1.1panPan2
SEPTIN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11023,370,393 - 23,396,922 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1023,371,558 - 23,396,205 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1023,304,474 - 23,331,048 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01024,115,099 - 24,141,685 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1024,115,112 - 24,151,564 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11023,832,430 - 23,855,170 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01024,153,414 - 24,179,997 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01024,327,530 - 24,354,096 (-)NCBIUU_Cfam_GSD_1.0
Septin3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049457,020,768 - 7,045,298 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493649231,182 - 55,866 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEPTIN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl56,623,265 - 6,660,702 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.156,631,750 - 6,657,837 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.253,698,534 - 3,721,309 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SEPTIN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11924,503,235 - 24,532,092 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666045100,878,157 - 100,905,434 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Septin3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247526,737,704 - 6,757,920 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Septin3
141 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:118
Count of miRNA genes:88
Interacting mature miRNAs:103
Transcripts:ENSRNOT00000010233, ENSRNOT00000010491
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)768938720113886318Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)768938720113886318Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)768938720113886318Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7112308254133492884Rat
1357339Stl14Serum triglyceride level QTL 143.450.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7112729683133492707Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 2 2 74 10 24
Low 2 32 18 9 15 9 5 5 10 16 11 5
Below cutoff 1 11 33 26 4 26 3 5 6 1 3

Sequence


RefSeq Acc Id: ENSRNOT00000010491   ⟹   ENSRNOP00000010491
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7113,794,138 - 113,811,087 (+)Ensembl
Rnor_6.0 Ensembl7123,510,804 - 123,526,542 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000104535   ⟹   ENSRNOP00000082443
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7113,786,092 - 113,807,797 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000104827   ⟹   ENSRNOP00000083723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7113,783,095 - 113,811,087 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000108676   ⟹   ENSRNOP00000094557
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7113,783,095 - 113,808,612 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000118624   ⟹   ENSRNOP00000086729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7113,789,722 - 113,811,087 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000118944   ⟹   ENSRNOP00000086657
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7113,797,358 - 113,808,612 (+)Ensembl
RefSeq Acc Id: NM_019375   ⟹   NP_062248
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87115,669,807 - 115,691,171 (+)NCBI
mRatBN7.27113,789,722 - 113,811,087 (+)NCBI
Rnor_6.07123,506,535 - 123,526,542 (+)NCBI
Rnor_5.07123,491,254 - 123,511,261 (+)NCBI
RGSC_v3.47120,650,069 - 120,669,466 (+)RGD
Celera7110,104,873 - 110,124,400 (+)RGD
Sequence:
RefSeq Acc Id: XM_039079788   ⟹   XP_038935716
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87115,664,271 - 115,691,173 (+)NCBI
mRatBN7.27113,784,212 - 113,811,089 (+)NCBI
RefSeq Acc Id: XM_039079790   ⟹   XP_038935718
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87115,669,399 - 115,691,173 (+)NCBI
mRatBN7.27113,789,312 - 113,811,089 (+)NCBI
RefSeq Acc Id: XM_063264163   ⟹   XP_063120233
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87115,663,538 - 115,691,173 (+)NCBI
RefSeq Acc Id: XM_063264164   ⟹   XP_063120234
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87115,659,414 - 115,691,173 (+)NCBI
RefSeq Acc Id: NP_062248   ⟸   NM_019375
- UniProtKB: Q9WU35 (UniProtKB/Swiss-Prot),   Q9WU34 (UniProtKB/Swiss-Prot),   Q9R245 (UniProtKB/Swiss-Prot),   A0A8I6A6E2 (UniProtKB/TrEMBL),   A6HT54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000010491   ⟸   ENSRNOT00000010491
RefSeq Acc Id: XP_038935716   ⟸   XM_039079788
- Peptide Label: isoform X1
- UniProtKB: A0A8I6G9D9 (UniProtKB/TrEMBL),   A0A8I6AME4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038935718   ⟸   XM_039079790
- Peptide Label: isoform X3
- UniProtKB: A6HT56 (UniProtKB/TrEMBL),   F1LMH0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000094557   ⟸   ENSRNOT00000108676
RefSeq Acc Id: ENSRNOP00000086729   ⟸   ENSRNOT00000118624
RefSeq Acc Id: ENSRNOP00000082443   ⟸   ENSRNOT00000104535
RefSeq Acc Id: ENSRNOP00000086657   ⟸   ENSRNOT00000118944
RefSeq Acc Id: ENSRNOP00000083723   ⟸   ENSRNOT00000104827
RefSeq Acc Id: XP_063120234   ⟸   XM_063264164
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063120233   ⟸   XM_063264163
- Peptide Label: isoform X2
Protein Domains
Septin-type G

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WU34-F1-model_v2 AlphaFold Q9WU34 1-358 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621745 AgrOrtholog
BioCyc Gene G2FUF-32632 BioCyc
Ensembl Genes ENSRNOG00000007686 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000010491.7 UniProtKB/TrEMBL
  ENSRNOT00000104535.1 UniProtKB/TrEMBL
  ENSRNOT00000104827.1 UniProtKB/TrEMBL
  ENSRNOT00000108676.1 UniProtKB/TrEMBL
  ENSRNOT00000118624 ENTREZGENE
  ENSRNOT00000118624.1 UniProtKB/TrEMBL
  ENSRNOT00000118944.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro G_SEPTIN_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Septin3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:56003 UniProtKB/Swiss-Prot
NCBI Gene 56003 ENTREZGENE
PANTHER NEURONAL-SPECIFIC SEPTIN-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB 3-Sep RGD
PhenoGen Septin3 PhenoGen
PIRSF Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS SEPTIN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007686 RatGTEx
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZX16_RAT UniProtKB/TrEMBL
  A0A8I6A6E2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A6F5_RAT UniProtKB/TrEMBL
  A0A8I6AME4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G9D9 ENTREZGENE, UniProtKB/TrEMBL
  A6HT54 ENTREZGENE, UniProtKB/TrEMBL
  A6HT56 ENTREZGENE, UniProtKB/TrEMBL
  F1LMH0 ENTREZGENE, UniProtKB/TrEMBL
  Q9R245 ENTREZGENE
  Q9WU34 ENTREZGENE
  Q9WU35 ENTREZGENE
  SEPT3_RAT UniProtKB/Swiss-Prot
UniProt Secondary Q9R245 UniProtKB/Swiss-Prot
  Q9WU35 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-05 Septin3  septin 3  Sept3  septin 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Sept3  septin 3  3-Sep  septin 3  Symbol and Name status set to approved 1299863 APPROVED
2004-09-10 Sept3  septin 3      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 3-Sep        Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in brain and testis 634004
gene_function a GTP-binding protein 634004