Tmem14c (transmembrane protein 14C) - Rat Genome Database

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Gene: Tmem14c (transmembrane protein 14C) Rattus norvegicus
Analyze
Symbol: Tmem14c
Name: transmembrane protein 14C
RGD ID: 621692
Description: Predicted to be involved in regulation of heme biosynthetic process. Predicted to act upstream of or within several processes, including erythrocyte differentiation; mitochondrial transport; and nitrogen compound transport. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrial membrane. Orthologous to several human genes including TMEM14C (transmembrane protein 14C); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Cdtw1; P11 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81723,939,501 - 23,945,622 (-)NCBIGRCr8
mRatBN7.21723,733,769 - 23,739,906 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1723,733,894 - 23,753,320 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1723,603,484 - 23,609,583 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01725,206,952 - 25,213,051 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01723,544,453 - 23,550,552 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01721,571,510 - 21,577,651 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1721,571,518 - 21,577,631 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01723,554,045 - 23,560,180 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41729,701,923 - 29,708,044 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11729,706,089 - 29,710,339 (-)NCBI
Celera1723,403,979 - 23,410,100 (-)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:14651853   PMID:18614015   PMID:25157825  


Genomics

Comparative Map Data
Tmem14c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81723,939,501 - 23,945,622 (-)NCBIGRCr8
mRatBN7.21723,733,769 - 23,739,906 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1723,733,894 - 23,753,320 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1723,603,484 - 23,609,583 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01725,206,952 - 25,213,051 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01723,544,453 - 23,550,552 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01721,571,510 - 21,577,651 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1721,571,518 - 21,577,631 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01723,554,045 - 23,560,180 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41729,701,923 - 29,708,044 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11729,706,089 - 29,710,339 (-)NCBI
Celera1723,403,979 - 23,410,100 (-)NCBICelera
Cytogenetic Map17p12NCBI
TMEM14C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38610,723,070 - 10,731,127 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl610,722,915 - 10,731,129 (+)EnsemblGRCh38hg38GRCh38
GRCh37610,723,303 - 10,731,360 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36610,831,324 - 10,839,348 (+)NCBINCBI36Build 36hg18NCBI36
Build 34610,831,323 - 10,839,347NCBI
Celera611,951,641 - 11,959,855 (+)NCBICelera
Cytogenetic Map6p24.2NCBI
HuRef610,598,765 - 10,606,980 (+)NCBIHuRef
CHM1_1610,725,261 - 10,733,475 (+)NCBICHM1_1
T2T-CHM13v2.0610,590,767 - 10,598,824 (+)NCBIT2T-CHM13v2.0
Tmem14c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391341,169,726 - 41,176,058 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1341,169,768 - 41,176,062 (+)EnsemblGRCm39 Ensembl
GRCm381341,016,250 - 41,022,582 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1341,016,292 - 41,022,586 (+)EnsemblGRCm38mm10GRCm38
MGSCv371341,111,619 - 41,117,951 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361341,027,266 - 41,033,552 (+)NCBIMGSCv36mm8
Celera1342,098,081 - 42,104,427 (+)NCBICelera
Cytogenetic Map13A3.3NCBI
cM Map1320.25NCBI
Tmem14c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554653,621,652 - 3,628,355 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554653,621,652 - 3,628,355 (-)NCBIChiLan1.0ChiLan1.0
TMEM14C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2525,372,617 - 25,380,768 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1621,362,090 - 21,370,454 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0610,564,011 - 10,572,177 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1610,843,062 - 10,851,278 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl610,843,062 - 10,851,278 (+)Ensemblpanpan1.1panPan2
LOC478720
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13510,454,501 - 10,462,296 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3510,403,361 - 10,411,166 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03510,558,831 - 10,566,639 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13510,387,855 - 10,395,670 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03510,435,099 - 10,442,904 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03511,755,626 - 11,763,442 (+)NCBIUU_Cfam_GSD_1.0
Tmem14c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494613,964,481 - 13,971,237 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365342,233,467 - 2,240,223 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100517166
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.177,462,187 - 7,530,881 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.277,774,429 - 7,781,646 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103222178
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11761,416,703 - 61,424,884 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236691521,292 - 5,427 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem14c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475615,179,801 - 15,187,475 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tmem14c
82 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:90
Count of miRNA genes:43
Interacting mature miRNAs:43
Transcripts:ENSRNOT00000020737, ENSRNOT00000066371
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat
7394837Memor18Memory QTL 18exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)171864018263640182Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172308056759555013Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318457246843Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat

Markers in Region
D17Got30  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21723,725,829 - 23,726,005 (+)MAPPERmRatBN7.2
Rnor_6.01721,563,571 - 21,563,746NCBIRnor6.0
Rnor_5.01723,546,106 - 23,546,281UniSTSRnor5.0
RGSC_v3.41729,693,983 - 29,694,159RGDRGSC3.4
RGSC_v3.41729,693,984 - 29,694,159UniSTSRGSC3.4
RGSC_v3.11729,696,825 - 29,697,000RGD
Celera1723,396,040 - 23,396,215UniSTS
RH 3.4 Map17278.6UniSTS
RH 3.4 Map17278.6RGD
RH 2.0 Map17198.4RGD
Cytogenetic Map17p12UniSTS
RH94552  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21723,729,812 - 23,729,978 (+)MAPPERmRatBN7.2
Rnor_6.01721,567,554 - 21,567,719NCBIRnor6.0
Rnor_5.01723,550,089 - 23,550,254UniSTSRnor5.0
RGSC_v3.41729,697,967 - 29,698,132UniSTSRGSC3.4
Celera1723,400,023 - 23,400,188UniSTS
RH 3.4 Map17278.3UniSTS
Cytogenetic Map17p12UniSTS
RH139150  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21723,741,481 - 23,741,632 (+)MAPPERmRatBN7.2
Rnor_6.01721,579,223 - 21,579,373NCBIRnor6.0
Rnor_5.01723,561,758 - 23,561,908UniSTSRnor5.0
RGSC_v3.41729,709,636 - 29,709,786UniSTSRGSC3.4
Celera1723,411,692 - 23,411,842UniSTS
RH 3.4 Map17279.7UniSTS
Cytogenetic Map17p12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001135169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_134395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006253777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039095319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF083396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC158854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB744788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV107072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000020737   ⟹   ENSRNOP00000020737
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1721,571,518 - 21,577,085 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000066371   ⟹   ENSRNOP00000061240
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1723,733,894 - 23,753,320 (-)Ensembl
Rnor_6.0 Ensembl1721,571,518 - 21,577,631 (-)Ensembl
RefSeq Acc Id: NM_001135169   ⟹   NP_001128641
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81723,939,501 - 23,945,622 (-)NCBI
mRatBN7.21723,733,769 - 23,739,890 (-)NCBI
Rnor_6.01721,571,510 - 21,577,631 (-)NCBI
Rnor_5.01723,554,045 - 23,560,180 (-)NCBI
RGSC_v3.41729,701,923 - 29,708,044 (-)RGD
Celera1723,403,979 - 23,410,100 (-)RGD
Sequence:
RefSeq Acc Id: NM_134395   ⟹   NP_599222
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81723,939,501 - 23,945,076 (-)NCBI
mRatBN7.21723,733,769 - 23,739,344 (-)NCBI
Rnor_6.01721,571,510 - 21,577,085 (-)NCBI
Rnor_5.01723,554,045 - 23,560,180 (-)NCBI
RGSC_v3.41729,701,923 - 29,708,044 (-)RGD
Celera1723,403,979 - 23,409,554 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006253777   ⟹   XP_006253839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81723,939,501 - 23,945,487 (-)NCBI
mRatBN7.21723,733,769 - 23,739,906 (-)NCBI
Rnor_6.01721,571,510 - 21,577,651 (-)NCBI
Rnor_5.01723,554,045 - 23,560,180 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039095319   ⟹   XP_038951247
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81723,939,501 - 23,945,129 (-)NCBI
mRatBN7.21723,733,769 - 23,739,279 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_599222   ⟸   NM_134395
- UniProtKB: B0BNJ9 (UniProtKB/TrEMBL),   F7FLK4 (UniProtKB/TrEMBL),   A6JGV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001128641   ⟸   NM_001135169
- UniProtKB: B0BNJ9 (UniProtKB/TrEMBL),   F7FLK4 (UniProtKB/TrEMBL),   A6JGV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006253839   ⟸   XM_006253777
- Peptide Label: isoform X1
- UniProtKB: B0BNJ9 (UniProtKB/TrEMBL),   F7FLK4 (UniProtKB/TrEMBL),   A6JGV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000020737   ⟸   ENSRNOT00000020737
RefSeq Acc Id: ENSRNOP00000061240   ⟸   ENSRNOT00000066371
RefSeq Acc Id: XP_038951247   ⟸   XM_039095319
- Peptide Label: isoform X1
- UniProtKB: B0BNJ9 (UniProtKB/TrEMBL),   F7FLK4 (UniProtKB/TrEMBL),   A6JGV3 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q924P2-F1-model_v2 AlphaFold Q924P2 1-115 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700376
Promoter ID:EPDNEW_R10899
Type:initiation region
Name:Tmem14c_1
Description:transmembrane protein 14C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01721,577,619 - 21,577,679EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621692 AgrOrtholog
BioCyc Gene G2FUF-9729 BioCyc
Ensembl Genes ENSRNOG00000015437 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000066371.4 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.1740 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7936967 IMAGE-MGC_LOAD
InterPro TMEM14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TMEM14_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:171432 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:188374 IMAGE-MGC_LOAD
NCBI Gene 171432 ENTREZGENE
PANTHER PTHR12668 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 14C-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Tmemb_14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tmem14c PhenoGen
RatGTEx ENSRNOG00000015437 RatGTEx
UniProt A6JGV3 ENTREZGENE, UniProtKB/TrEMBL
  B0BNJ9 ENTREZGENE, UniProtKB/TrEMBL
  F7FLK4 ENTREZGENE, UniProtKB/TrEMBL
  Q924P2 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-22 Tmem14c  transmembrane protein 14C  Cdtw1  P11 protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-08-07 Cdtw1  P11 protein      Symbol and Name status set to provisional 70820 PROVISIONAL