Gene: Eif4g2-ps1 (eukaryotic translation initiation factor 4, gamma 2, pseudogene 1) Rattus norvegicus |
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Analyze |
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Symbol: |
Eif4g2-ps1 |
Name: |
eukaryotic translation initiation factor 4, gamma 2, pseudogene 1 |
RGD ID: |
621477 |
Description: |
pseudogene of the gamma 2 subunit of translation initiation factor Eif4f |
Type: |
pseudo
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RefSeq Status: |
INFERRED |
Previously known as: |
Developmentally-regulated cardiac factor-6; DRCF-6; Eif4g2; eukaryotic translation initiation factor 4 gamma, 2; MGC109314; NAT1 |
Related Functional Gene: |
Eif4g2
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Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 9 | 40,542,958 - 40,546,739 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 33,046,884 - 33,050,665 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | UTH_Rnor_SHR_Utx | 9 | 41,539,662 - 41,543,443 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 46,670,692 - 46,674,472 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 44,952,554 - 44,956,334 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 37,056,827 - 37,060,609 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 35,861,750 - 35,865,532 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 29,441,661 - 29,451,456 (+) | ENTREZGENE | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 9 | 29,452,471 - 29,452,858 (+) | NCBI | | | | | Celera | 9 | 30,867,202 - 30,871,118 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q21 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
QTLs in Region (mRatBN7.2)
9589055 | Scfw5 | Subcutaneous fat weight QTL 5 | 5.55 | 0.001 | subcutaneous adipose mass (VT:1000472) | abdominal subcutaneous fat pad weight (CMO:0002069) | 9 | 1 | 37999212 | Rat | 7411592 | Foco8 | Food consumption QTL 8 | 7.4 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 1 | 37999212 | Rat | 9589158 | Gluco65 | Glucose level QTL 65 | 6.82 | 0.001 | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 9 | 1 | 37999212 | Rat | 1300124 | Cm4 | Cardiac mass QTL 4 | 3.55 | | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 9 | 1 | 40594091 | Rat | 1298088 | Edpm11 | Estrogen-dependent pituitary mass QTL 11 | 2.5 | | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 9 | 1 | 43718459 | Rat | 1641911 | Alcrsp13 | Alcohol response QTL 13 | | | response to alcohol trait (VT:0010489) | brain neurotensin receptor 1 density (CMO:0002068) | 9 | 1 | 43718459 | Rat | 10054125 | Srcrt7 | Stress Responsive Cort QTL 7 | 3.33 | 0.0011 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 9 | 1 | 87073594 | Rat | 1331757 | Cdexp1 | CD45RC expression in CD8 T cells QTL 1 | 4.3 | | CD8-positive T cell quantity (VT:0008077) | blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990) | 9 | 1024537 | 67509080 | Rat | 1354650 | Despr5 | Despair related QTL 5 | 4.01 | 0.0017 | locomotor behavior trait (VT:0001392) | amount of time spent in voluntary immobility (CMO:0001043) | 9 | 1254084 | 46254084 | Rat | 2303559 | Gluco54 | Glucose level QTL 54 | 2 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 9 | 1254084 | 46254084 | Rat | 61425 | Cia15 | Collagen induced arthritis QTL 15 | 4.6 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 9 | 5109826 | 42921101 | Rat | 631211 | Bw4 | Body weight QTL4 | 5.31 | | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 9 | 5109826 | 50109826 | Rat | 11353947 | Bp392 | Blood pressure QTL 392 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 7283252 | 52283252 | Rat | 9589133 | Insul26 | Insulin level QTL 26 | 17.96 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 9 | 8952560 | 53952560 | Rat | 7411609 | Foco16 | Food consumption QTL 16 | 25.6 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 8952560 | 53952560 | Rat | 1600365 | Mcs20 | Mammary carcinoma susceptibility QTL 20 | 3 | | mammary gland integrity trait (VT:0010552) | mammary tumor growth rate (CMO:0000344) | 9 | 13533770 | 42791750 | Rat | 724543 | Cm20 | Cardiac mass QTL 20 | 3.9 | | heart mass (VT:0007028) | calculated heart weight (CMO:0000073) | 9 | 16961398 | 40594091 | Rat | 631680 | Cm11 | Cardiac mass QTL 11 | 3.1 | 0.00089 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 9 | 20430519 | 65430519 | Rat | 70186 | Niddm26 | Non-insulin dependent diabetes mellitus QTL 26 | 3.87 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 9 | 22071169 | 86369743 | Rat | 631643 | Bp120 | Blood pressure QTL 120 | 3 | 0.004 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 22071200 | 67071200 | Rat | 1598823 | Memor16 | Memory QTL 16 | 1.9 | | exploratory behavior trait (VT:0010471) | difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678) | 9 | 22133322 | 49968732 | Rat | 7207805 | Bmd88 | Bone mineral density QTL 88 | 4 | | femur mineral mass (VT:0010011) | total volumetric bone mineral density (CMO:0001728) | 9 | 23754024 | 58157242 | Rat | 1300180 | Bw14 | Body weight QTL 14 | 3.776 | | body mass (VT:0001259) | body weight (CMO:0000012) | 9 | 23754024 | 61381613 | Rat | 7207814 | Bmd91 | Bone mineral density QTL 91 | 3.5 | | femur size trait (VT:1000369) | femoral neck cross-sectional area (CMO:0001697) | 9 | 23754144 | 83851531 | Rat | 70218 | Cm28 | Cardiac mass QTL 28 | 8.3 | 0.0001 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 9 | 25268044 | 79271759 | Rat | 724544 | Uae9 | Urinary albumin excretion QTL 9 | 4.5 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 9 | 25268044 | 114175309 | Rat | 731164 | Uae25 | Urinary albumin excretion QTL 25 | 3.5 | 0.0001 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 9 | 25661188 | 100929786 | Rat | 1641894 | Alcrsp12 | Alcohol response QTL 12 | | | response to alcohol trait (VT:0010489) | brain neurotensin receptor 1 density (CMO:0002068) | 9 | 27468639 | 72468639 | Rat | 7411656 | Foco26 | Food consumption QTL 26 | 9.8 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 32535505 | 77535505 | Rat | 7411571 | Bw138 | Body weight QTL 138 | 14.3 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 9 | 32535505 | 77535505 | Rat | |
Markers in Region
RH129883 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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mRatBN7.2 | 1 | 165,181,433 - 165,181,615 (+) | MAPPER | mRatBN7.2 | Rnor_6.0 | 1 | 175,883,363 - 175,883,544 | NCBI | Rnor6.0 | Rnor_5.0 | 1 | 182,868,165 - 182,868,346 | UniSTS | Rnor5.0 | RGSC_v3.4 | 1 | 168,829,100 - 168,829,281 | UniSTS | RGSC3.4 | Celera | 1 | 163,069,816 - 163,069,997 | UniSTS | | RH 3.4 Map | 1 | 1330.1 | UniSTS | | Cytogenetic Map | 1 | q33 | UniSTS | | Cytogenetic Map | 9 | q21 | UniSTS | |
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RH142927 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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mRatBN7.2 | 1 | 165,183,381 - 165,183,626 (+) | MAPPER | mRatBN7.2 | Rnor_6.0 | 1 | 175,885,311 - 175,885,555 | NCBI | Rnor6.0 | Rnor_5.0 | 1 | 182,870,113 - 182,870,357 | UniSTS | Rnor5.0 | RGSC_v3.4 | 1 | 168,831,048 - 168,831,292 | UniSTS | RGSC3.4 | Celera | 1 | 163,071,764 - 163,072,008 | UniSTS | | RH 3.4 Map | 1 | 1330.1 | UniSTS | | Cytogenetic Map | 1 | q33 | UniSTS | | Cytogenetic Map | 9 | q21 | UniSTS | |
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RH129136 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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mRatBN7.2 | 1 | 165,181,489 - 165,181,684 (+) | MAPPER | mRatBN7.2 | Rnor_6.0 | 1 | 175,883,419 - 175,883,613 | NCBI | Rnor6.0 | Rnor_5.0 | 1 | 182,868,221 - 182,868,415 | UniSTS | Rnor5.0 | RGSC_v3.4 | 1 | 168,829,156 - 168,829,350 | UniSTS | RGSC3.4 | Celera | 1 | 163,069,872 - 163,070,066 | UniSTS | | RH 3.4 Map | 1 | 1330.1 | UniSTS | | Cytogenetic Map | 1 | q33 | UniSTS | | Cytogenetic Map | 9 | q21 | UniSTS | |
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MARC_8851-8852:992359168:1 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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Rnor_5.0 | 9 | 35,863,092 - 35,863,572 | NCBI | Rnor5.0 | Rnor_5.0 | 7 | 1,039,179 - 1,039,658 | NCBI | Rnor5.0 | Rnor_5.0 | 1 | 182,873,056 - 182,874,505 | NCBI | Rnor5.0 | RGSC_v3.4 | 1 | 168,833,995 - 168,835,289 | UniSTS | RGSC3.4 | RGSC_v3.4 | 9 | 29,449,006 - 29,449,484 | UniSTS | RGSC3.4 | Cytogenetic Map | 1 | q33 | UniSTS | | Cytogenetic Map | 9 | q21 | UniSTS | |
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Eif4g2 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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Rnor_5.0 | 7 | 1,040,502 - 1,040,710 | NCBI | Rnor5.0 | Rnor_5.0 | 1 | 182,877,619 - 182,878,882 | NCBI | Rnor5.0 | Rnor_5.0 | 9 | 35,862,026 - 35,862,248 | NCBI | Rnor5.0 | RGSC_v3.4 | 1 | 168,838,913 - 168,840,175 | UniSTS | RGSC3.4 | RGSC_v3.4 | 9 | 29,447,940 - 29,448,161 | UniSTS | RGSC3.4 | Celera | 1 | 163,079,257 - 163,080,519 | UniSTS | | Celera | 9 | 30,867,479 - 30,867,700 | UniSTS | | Cytogenetic Map | 1 | q33 | UniSTS | | Cytogenetic Map | 9 | q21 | UniSTS | | Cytogenetic Map | 15 | p15 | UniSTS | |
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Expression
Sequence
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2007-09-25 |
Eif4g2-ps1 |
eukaryotic translation initiation factor 4, gamma 2, pseudogene 1 |
Eif4g2 |
eukaryotic translation initiation factor 4 gamma, 2 |
Symbol and Name updated |
1299863 |
APPROVED |
2005-01-20 |
Eif4g2 |
eukaryotic translation initiation factor 4 gamma, 2 |
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Symbol and Name status set to approved |
1299863 |
APPROVED |
2002-08-07 |
Eif4g2 |
eukaryotic translation initiation factor 4 gamma, 2 |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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