Gene: Clcn3 (chloride voltage-gated channel 3) Rattus norvegicus
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Symbol: Clcn3
Name: chloride voltage-gated channel 3
Description: ENCODES a protein that exhibits chloride channel activity; ion channel activity; voltage-gated chloride channel activity; INVOLVED IN chloride transport; ion transport; adult locomotory behavior (ortholog); ASSOCIATED WITH adult brain ependymoma (ortholog); adult spinal cord ependymoma (ortholog); adult spinal cord glioblastoma multiforme (ortholog); FOUND IN apical plasma membrane; inhibitory synapse; integral component of membrane; INTERACTS WITH 2,4-dinitrotoluene; ammonium chloride; chlorpyrifos
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chloride channel 3; chloride channel protein 3; chloride channel, voltage-sensitive 3; chloride transporter ClC-3; ClC-3; h(+)/Cl(-) exchange transporter 3; protein kinase C-regulated chloride channel
Orthologs:
Homo sapiens (human) : CLCN3 (chloride voltage-gated channel 3)  HGNC
Mus musculus (house mouse) : Clcn3 (chloride channel, voltage-sensitive 3)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Clcn3 (chloride voltage-gated channel 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCN3 (chloride voltage-gated channel 3)
Canis lupus familiaris (dog) : CLCN3 (chloride voltage-gated channel 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcn3 (chloride voltage-gated channel 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01632,448,821 - 32,520,649 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01632,283,743 - 32,355,489 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41632,447,259 - 32,518,533 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11632,447,333 - 32,517,457 (+)NCBI
Celera1629,122,247 - 29,193,279 (+)NCBI
Cytogenetic Map16p12NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Clcn3
NCBI Gene
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RGD Object Information
RGD ID: 621219
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2017-05-30
Status: ACTIVE