Rab26 (RAB26, member RAS oncogene family) - Rat Genome Database

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Gene: Rab26 (RAB26, member RAS oncogene family) Rattus norvegicus
Analyze
Symbol: Rab26
Name: RAB26, member RAS oncogene family
RGD ID: 620890
Description: Enables GTP binding activity. Involved in exocrine system development and regulation of exocytosis. Located in plasma membrane. Orthologous to human RAB26 (RAB26, member RAS oncogene family); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ras-related protein Rab-26
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,057,942 - 14,062,602 (-)NCBIGRCr8
mRatBN7.21013,553,395 - 13,558,063 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,299,890 - 18,304,657 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,788,735 - 17,793,502 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,287,922 - 13,292,689 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,894,271 - 13,898,578 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,893,290 - 13,898,855 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,711,256 - 13,715,563 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,780,502 - 13,784,809 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11013,780,501 - 13,783,719 (-)NCBI
Celera1013,233,628 - 13,237,935 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function
GMP binding  (IEA,ISO,ISS)
GTP binding  (IBA,IDA,IEA,ISO,TAS)
GTPase activity  (IBA,IEA,TAS)
protein binding  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
8. Molecular cloning of a new member of the Rab protein family, Rab 26, from rat pancreas. Wagner AC, etal., Biochem Biophys Res Commun 1995 Feb 27;207(3):950-6.
9. Expression, characterization, and localization of Rab26, a low molecular weight GTP-binding protein, in the rat parotid gland. Yoshie S, etal., Histochem Cell Biol. 2000 Apr;113(4):259-63.
Additional References at PubMed
PMID:15489334   PMID:20038531   PMID:23105096   PMID:25643395   PMID:29084947  


Genomics

Comparative Map Data
Rab26
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,057,942 - 14,062,602 (-)NCBIGRCr8
mRatBN7.21013,553,395 - 13,558,063 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,299,890 - 18,304,657 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,788,735 - 17,793,502 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,287,922 - 13,292,689 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,894,271 - 13,898,578 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,893,290 - 13,898,855 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,711,256 - 13,715,563 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,780,502 - 13,784,809 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11013,780,501 - 13,783,719 (-)NCBI
Celera1013,233,628 - 13,237,935 (-)NCBICelera
Cytogenetic Map10q12NCBI
RAB26
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,148,144 - 2,154,165 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,140,803 - 2,154,165 (+)EnsemblGRCh38hg38GRCh38
GRCh37162,198,145 - 2,204,166 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,138,652 - 2,144,142 (+)NCBINCBI36Build 36hg18NCBI36
Build 34162,138,651 - 2,144,141NCBI
Celera162,413,043 - 2,418,558 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,124,981 - 2,130,406 (+)NCBIHuRef
CHM1_1162,198,600 - 2,204,114 (+)NCBICHM1_1
T2T-CHM13v2.0162,170,604 - 2,176,626 (+)NCBIT2T-CHM13v2.0
Rab26
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,748,038 - 24,752,696 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1724,746,215 - 24,753,184 (-)EnsemblGRCm39 Ensembl
GRCm381724,529,054 - 24,533,747 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,527,241 - 24,534,210 (-)EnsemblGRCm38mm10GRCm38
MGSCv371724,665,999 - 24,670,692 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361724,256,654 - 24,261,489 (-)NCBIMGSCv36mm8
Celera1725,045,266 - 25,049,953 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.4NCBI
Rab26
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,114,333 - 15,120,123 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,114,333 - 15,119,481 (-)NCBIChiLan1.0ChiLan1.0
LOC100977490
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,651,129 - 2,656,678 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1166,432,500 - 6,438,014 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,006,847 - 1,012,263 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1162,250,286 - 2,254,513 (+)NCBIpanpan1.1PanPan1.1panPan2
RAB26
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,806,750 - 38,812,541 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,807,487 - 38,812,379 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,045,910 - 40,051,589 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,115,273 - 39,120,961 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,115,276 - 39,121,022 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,800,104 - 38,805,782 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,772,414 - 38,778,087 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,251,172 - 39,256,854 (-)NCBIUU_Cfam_GSD_1.0
Rab26
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,807,158 - 104,813,110 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366941,893,076 - 1,902,605 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366941,896,360 - 1,902,272 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAB26
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,831,981 - 39,837,515 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1339,831,981 - 39,837,510 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2342,344,040 - 42,349,574 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RAB26
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.152,041,871 - 2,049,623 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,043,829 - 2,049,836 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606829,012,370 - 29,018,651 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rab26
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913101,900 - 107,691 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624913101,788 - 107,267 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rab26
12 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:205
Count of miRNA genes:153
Interacting mature miRNAs:173
Transcripts:ENSRNOT00000004249
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
1576304Schws7Schwannoma susceptibility QTL 70.0115nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)10476552719816042Rat
737820Alc9Alcohol consumption QTL 92.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10514402719233348Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10615418215990232Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10538701450387014Rat
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10514402717245662Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat

Markers in Region
RH130595  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21013,553,457 - 13,553,669 (+)MAPPERmRatBN7.2
Rnor_6.01013,894,331 - 13,894,542NCBIRnor6.0
Rnor_5.01013,711,316 - 13,711,527UniSTSRnor5.0
RGSC_v3.41013,780,562 - 13,780,773UniSTSRGSC3.4
Celera1013,233,688 - 13,233,899UniSTS
Cytogenetic Map10q12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 1 39
Low 3 40 43 28 18 28 5 5 35 35 41 11 5
Below cutoff 3 13 13 13 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_133580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005489682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005489683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005489684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010055125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC093937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC103090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U18771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000004249   ⟹   ENSRNOP00000004249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)Ensembl
Rnor_6.0 Ensembl1013,893,290 - 13,898,855 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000097378   ⟹   ENSRNOP00000083203
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)Ensembl
RefSeq Acc Id: NM_133580   ⟹   NP_598264
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,942 - 14,062,577 (-)NCBI
mRatBN7.21013,553,395 - 13,558,030 (-)NCBI
Rnor_6.01013,894,271 - 13,898,578 (-)NCBI
Rnor_5.01013,711,256 - 13,715,563 (-)NCBI
RGSC_v3.41013,780,502 - 13,784,809 (-)RGD
Celera1013,233,628 - 13,237,935 (-)RGD
Sequence:
RefSeq Acc Id: XM_039085122   ⟹   XP_038941050
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,602 (-)NCBI
mRatBN7.21013,553,395 - 13,558,062 (-)NCBI
RefSeq Acc Id: XM_039085125   ⟹   XP_038941053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,602 (-)NCBI
mRatBN7.21013,553,395 - 13,558,062 (-)NCBI
RefSeq Acc Id: XM_039085128   ⟹   XP_038941056
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,601 (-)NCBI
mRatBN7.21013,553,395 - 13,558,062 (-)NCBI
RefSeq Acc Id: XM_039085130   ⟹   XP_038941058
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,059 (-)NCBI
RefSeq Acc Id: XM_039085134   ⟹   XP_038941062
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,600 (-)NCBI
mRatBN7.21013,553,395 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_039085136   ⟹   XP_038941064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,600 (-)NCBI
mRatBN7.21013,553,395 - 13,558,059 (-)NCBI
RefSeq Acc Id: XM_039085137   ⟹   XP_038941065
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,059 (-)NCBI
RefSeq Acc Id: XM_039085138   ⟹   XP_038941066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,058 (-)NCBI
RefSeq Acc Id: XM_039085140   ⟹   XP_038941068
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,601 (-)NCBI
mRatBN7.21013,553,395 - 13,558,061 (-)NCBI
RefSeq Acc Id: XM_039085143   ⟹   XP_038941071
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,726 - 14,062,601 (-)NCBI
mRatBN7.21013,554,167 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_039085144   ⟹   XP_038941072
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,622 - 14,062,599 (-)NCBI
mRatBN7.21013,554,166 - 13,558,058 (-)NCBI
RefSeq Acc Id: XM_039085145   ⟹   XP_038941073
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,733 - 14,062,601 (-)NCBI
mRatBN7.21013,554,187 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_039085146   ⟹   XP_038941074
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,057 (-)NCBI
RefSeq Acc Id: XM_039085147   ⟹   XP_038941075
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,292 - 14,062,601 (-)NCBI
mRatBN7.21013,553,834 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_063268366   ⟹   XP_063124436
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
RefSeq Acc Id: XM_063268368   ⟹   XP_063124438
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,835 - 14,062,601 (-)NCBI
RefSeq Acc Id: XR_005489682
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,621 - 14,062,600 (-)NCBI
mRatBN7.21013,554,072 - 13,558,060 (-)NCBI
RefSeq Acc Id: XR_005489683
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,647 - 14,062,601 (-)NCBI
mRatBN7.21013,554,093 - 13,558,060 (-)NCBI
RefSeq Acc Id: XR_005489684
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,647 - 14,062,601 (-)NCBI
mRatBN7.21013,554,106 - 13,558,060 (-)NCBI
RefSeq Acc Id: XR_010055125
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,619 - 14,062,599 (-)NCBI
RefSeq Acc Id: NP_598264   ⟸   NM_133580
- UniProtKB: P51156 (UniProtKB/Swiss-Prot),   Q6P6W7 (UniProtKB/Swiss-Prot),   A6HCT9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000004249   ⟸   ENSRNOT00000004249
RefSeq Acc Id: XP_038941056   ⟸   XM_039085128
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038941053   ⟸   XM_039085125
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038941050   ⟸   XM_039085122
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038941068   ⟸   XM_039085140
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038941062   ⟸   XM_039085134
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038941065   ⟸   XM_039085137
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZZI4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038941064   ⟸   XM_039085136
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038941058   ⟸   XM_039085130
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038941066   ⟸   XM_039085138
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038941074   ⟸   XM_039085146
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038941075   ⟸   XM_039085147
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038941072   ⟸   XM_039085144
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038941071   ⟸   XM_039085143
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038941073   ⟸   XM_039085145
- Peptide Label: isoform X13
RefSeq Acc Id: ENSRNOP00000083203   ⟸   ENSRNOT00000097378
RefSeq Acc Id: XP_063124436   ⟸   XM_063268366
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063124438   ⟸   XM_063268368
- Peptide Label: isoform X16

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P51156-F1-model_v2 AlphaFold P51156 1-257 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697015
Promoter ID:EPDNEW_R7540
Type:single initiation site
Name:Rab26_1
Description:RAB26, member RAS oncogene family
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01013,898,900 - 13,898,960EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620890 AgrOrtholog
BioCyc Gene G2FUF-25848 BioCyc
Ensembl Genes ENSRNOG00000042086 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000004249 ENTREZGENE
  ENSRNOT00000004249.7 UniProtKB/TrEMBL
  ENSRNOT00000097378.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:5599180 IMAGE-MGC_LOAD
InterPro P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:171111 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72316 IMAGE-MGC_LOAD
NCBI Gene 171111 ENTREZGENE
PANTHER LD44762P UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR47978 UniProtKB/TrEMBL
  RAS-RELATED PROTEIN RAB-26 UniProtKB/TrEMBL
  RAS-RELATED PROTEIN RAB-8A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ras UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rab26 PhenoGen
PRINTS RASTRNSFRMNG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE RAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
RatGTEx ENSRNOG00000042086 RatGTEx
SMART ARF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZZI4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2Q1F9_RAT UniProtKB/TrEMBL
  A6HCT9 ENTREZGENE, UniProtKB/TrEMBL
  P51156 ENTREZGENE
  Q6P6W7 ENTREZGENE
  RAB26_RAT UniProtKB/Swiss-Prot
UniProt Secondary Q6P6W7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-08-06 Rab26  RAB26, member RAS oncogene family      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in pancreas, kidney, brain, submandibular gland, and lung 633756
gene_product member of the Rab family of low molecular weight GTP-binding (LMWG) proteins 633756