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Gene Ontology Annotations
Gene Ontology AnnotationsBiological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | biological_process | | ND | | 1598407 | 11/2009: no relevant rat data | RGD | | cellular calcium ion homeostasis | | ISO | RGD:737358 | 1624291 | MGI:MGI:1100089 | RGD | MGI:MGI:5295788 PMID:21982707 | negative regulation of osteoclast differentiation | | ISO | RGD:737358 | 1624291 | MGI:MGI:5295788|PMID:21982707 | RGD | MGI:MGI:5295788 PMID:21982707 | phosphatidylinositol-3-phosphate biosynthetic process | | IDA | | 633135 | PMID:9295334 | GOC | | regulation of bone remodeling | | ISO | RGD:737358 | 1624291 | MGI:MGI:5297505 | RGD | MGI:MGI:5295788 PMID:21982707 | regulation of nucleocytoplasmic transport | | ISO | RGD:737358 | 1624291 | MGI:MGI:5295788|PMID:21982707 | RGD | MGI:MGI:5295788 PMID:21982707 | regulation of protein kinase B signaling cascade | | ISO | RGD:737358 | 1624291 | MGI:MGI:5464167|PMID:23078915 | RGD | MGI:MGI:5464167 PMID:23078915 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Pathway Annotations| External Database Links | |
| KEGG Pathway | Inositol phosphate metabolism |
| Metabolic pathways | |
| Phosphatidylinositol signaling system | |
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| KEGG Pathway | Inositol phosphate metabolism |
| Metabolic pathways | |
| Phosphatidylinositol signaling system | |
References - curated| 1. |
GOA data from the GO Consortium |
| 2. |
NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
| 3. |
Norris FA, etal., J Biol Chem 1997 Sep 19;272(38):23859-64. |
| 4. |
Pipeline to import KEGG annotations from KEGG into RGD Pathway Ontology |
| 5. |
RGD automated import pipeline for gene-chemical interactions |
| 6. |
RGD comprehensive gene curation |
RGD Disease Portals| Inpp4b has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| Inpp4b (Rattus norvegicus) |
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| INPP4B (Homo sapiens) |
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| Inpp4b (Mus musculus) |
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Position Markers| D15Mit4 |
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| D19Rat41 |
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| D19Rat120 |
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| D19Got19 |
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| AU047006 |
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| RH138607 |
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| RH143194 |
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| AU029195 |
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QTLs in Region (RGSC Genome Assembly v3.4)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NM_053917 | (Get FASTA) | Search GEO for Microarray Profiles |
| GenBank Nucleotide | AABR06098196 | (Get FASTA) | Search GEO for Microarray Profiles |
| AABR06098197 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098198 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098199 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098200 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098201 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098202 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098203 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098204 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098205 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098206 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098207 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098208 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098209 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098210 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098211 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098212 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098213 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098214 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098215 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098216 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AABR06098217 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097840 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097841 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097842 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097843 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097844 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097845 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097846 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097847 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097848 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097849 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097850 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097851 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097852 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097853 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097854 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097855 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097856 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097857 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097858 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097859 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097860 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097861 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097862 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097863 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097864 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097865 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097866 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097867 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097868 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097869 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097870 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097871 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHX01097872 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH473972 | (Get FASTA) | Search GEO for Microarray Profiles | |
| U96920 | (Get FASTA) | Search GEO for Microarray Profiles | |
| U96921 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_053917 | ||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||
| Protein Acc Id: | NP_446369 | ||||||||||||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_446369 | (Get FASTA) |
| GenBank Protein | AAB72151 | (Get FASTA) |
| AAB72152 | (Get FASTA) | |
| EDL92293 | (Get FASTA) | |
| EDL92294 | (Get FASTA) | |
| EDL92295 | (Get FASTA) | |
| Q9QWG5 | (Get FASTA) |
Strain Sequence Variants
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External Database Links| Database | Acc Id | Source(s) |
| Ensembl Genes | ENSRNOG00000018382 | ENTREZGENE, UniProtKB/Swiss-Prot |
| Ensembl Protein | ENSRNOP00000024981 | UniProtKB/Swiss-Prot |
| ENSRNOP00000025013 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| Ensembl Transcript | ENSRNOT00000024981 | UniProtKB/Swiss-Prot |
| ENSRNOT00000025013 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| Entrez Gene | 116699 | ENTREZGENE |
| Germonline | ENSRNOG00000018382 | UniProtKB/Swiss-Prot |
| HomoloGene Group ID | 20832 | ENTREZGENE |
| InterPro | C2_Ca-dep | UniProtKB/Swiss-Prot |
| C2_Ca/lipid-bd_dom_CaLB | UniProtKB/Swiss-Prot | |
| IPI | IPI00212160 | UniProtKB/Swiss-Prot |
| IPI00213063 | UniProtKB/Swiss-Prot | |
| KEGG Report | rno:116699 | ENTREZGENE, UniProtKB/Swiss-Prot |
| PROSITE | PS50004 | UniProtKB/Swiss-Prot |
| SMART | SM00239 | UniProtKB/Swiss-Prot |
| Superfamily-SCOP | C2_CaLB | UniProtKB/Swiss-Prot |
| Transposagen | Inpp4b |
Transposagen |
| UniGene | Rn.10829 | ENTREZGENE |
| UniProt | INP4B_RAT | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2004-12-14 | Inpp4b | inositol polyphosphate-4-phosphatase, type II | inositol polyphosphate-4-phosphatase, type II, 105kD | Name updated | 10779 | APPROVED | |
| 2002-08-07 | Inpp4b | inositol polyphosphate-4-phosphatase, type II, 105kD | Symbol and Name status set to provisional | 1724 | PROVISIONAL |
RGD Curation Notes| Note Type | Note | Reference |
|---|---|---|
| gene_expression | highly expressed in skeletal muscle and heart with some expression in most tissues | 633135 |
| gene_protein | a 105,257-Da protein | 633135 |
| More on Inpp4b | |
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Entrez Gene |
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Ensembl Gene |
![]() | Genome Browser |
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NCBI Map Viewer |
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Vista |
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Vista + UCSC |
| RGD Object Information | |
| RGD ID: | 620470 |
| Created: | 2002-08-06 |
| Species: | Rattus norvegicus |
| Last Modified: | 2013-04-16 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




