Gene: Trafd1 (TRAF type zinc finger domain containing 1) Rattus norvegicus
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Symbol: Trafd1
Name: TRAF type zinc finger domain containing 1
Description: ENCODES a protein that exhibits zinc ion binding (inferred); INVOLVED IN response to cytokine; negative regulation of innate immune response (ortholog); ASSOCIATED WITH Liver Cirrhosis, Experimental (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 4,4'-diaminodiphenylmethane
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Fln29; FLN29 gene product; TRAF-type zinc finger domain-containing protein 1
Orthologs:
Homo sapiens (human) : TRAFD1 (TRAF-type zinc finger domain containing 1)  HGNC  AGR
Mus musculus (house mouse) : Trafd1 (TRAF type zinc finger domain containing 1)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Trafd1 (TRAF-type zinc finger domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAFD1 (TRAF-type zinc finger domain containing 1)
Canis lupus familiaris (dog) : TRAFD1 (TRAF-type zinc finger domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trafd1 (TRAF-type zinc finger domain containing 1)
more info ...
Allele / Splice: Trafd1em1Mcwi  
Genetic Models: SS-Trafd1em1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01240,695,520 - 40,709,438 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01242,562,635 - 42,576,553 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41236,301,824 - 36,315,741 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11236,175,415 - 36,177,595 (+)NCBI
Celera1236,831,217 - 36,845,023 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trafd1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620171
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE