Mprip (myosin phosphatase Rho interacting protein) - Rat Genome Database

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Gene: Mprip (myosin phosphatase Rho interacting protein) Rattus norvegicus
Analyze
Symbol: Mprip
Name: myosin phosphatase Rho interacting protein
RGD ID: 619947
Description: Predicted to enable actin filament binding activity. Involved in maintenance of protein location in cell and positive regulation of protein phosphorylation. Located in stress fiber. Orthologous to human MPRIP (myosin phosphatase Rho interacting protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: M-rip; MGC114284; Mrip; myosin phosphatase Rho-interacting protein; myosin phosphatase-Rho interacting protein; p116Rip; Rho interacting protein 3; rho-interacting protein 3; Rhoip3; RIP3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81044,953,472 - 45,073,388 (+)NCBIGRCr8
mRatBN7.21044,453,949 - 44,573,843 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1044,453,929 - 44,569,118 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1049,154,280 - 49,269,675 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01048,644,640 - 48,760,035 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01044,148,250 - 44,263,639 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01046,018,397 - 46,133,580 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1046,018,659 - 46,133,571 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01045,775,202 - 45,890,071 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,975,683 - 46,090,601 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11045,989,375 - 46,103,686 (+)NCBI
Celera1043,716,586 - 43,830,972 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-fluorouracil  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
Benzo[k]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Brodifacoum  (EXP)
bromobenzene  (EXP)
caffeine  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
coumarin  (ISO)
crotonaldehyde  (ISO)
decabromodiphenyl ether  (ISO)
dicrotophos  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
flavonoids  (EXP)
folic acid  (ISO)
fonofos  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (EXP)
hydrogen peroxide  (ISO)
inulin  (ISO)
linsidomine  (EXP)
methamphetamine  (ISO)
methapyrilene  (ISO)
methidathion  (ISO)
methoxychlor  (EXP)
N-nitrosodiethylamine  (EXP)
ochratoxin A  (ISO)
ozone  (ISO)
paracetamol  (ISO)
parathion  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenethyl caffeate  (EXP)
pirinixic acid  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sunitinib  (ISO)
terbufos  (ISO)
testosterone  (ISO)
thapsigargin  (EXP)
titanium dioxide  (ISO)
trichostatin A  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
valproic acid  (EXP,ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
actin cytoskeleton  (IBA,IEA,ISO)
cytoplasm  (IEA)
cytosol  (IEA,ISO)
stress fiber  (IDA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. p116Rip is a novel filamentous actin-binding protein. Mulder J, etal., J Biol Chem 2003 Jul 18;278(29):27216-23. Epub 2003 May 5.
3. Receptor interacting protein kinase mediates necrotic cone but not rod cell death in a mouse model of inherited degeneration. Murakami Y, etal., Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14598-603. doi: 10.1073/pnas.1206937109. Epub 2012 Aug 20.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. Targeting by myosin phosphatase-RhoA interacting protein mediates RhoA/ROCK regulation of myosin phosphatase. Riddick N, etal., J Cell Biochem. 2008 Mar 1;103(4):1158-70.
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:15489334   PMID:16243315   PMID:16641100   PMID:21423176   PMID:22322972   PMID:22871113   PMID:23374330   PMID:25468996   PMID:34772825   PMID:35352799  
PMID:38142589  


Genomics

Comparative Map Data
Mprip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81044,953,472 - 45,073,388 (+)NCBIGRCr8
mRatBN7.21044,453,949 - 44,573,843 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1044,453,929 - 44,569,118 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1049,154,280 - 49,269,675 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01048,644,640 - 48,760,035 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01044,148,250 - 44,263,639 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01046,018,397 - 46,133,580 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1046,018,659 - 46,133,571 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01045,775,202 - 45,890,071 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,975,683 - 46,090,601 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11045,989,375 - 46,103,686 (+)NCBI
Celera1043,716,586 - 43,830,972 (+)NCBICelera
Cytogenetic Map10q22NCBI
MPRIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381717,042,457 - 17,192,643 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1717,042,457 - 17,217,679 (+)EnsemblGRCh38hg38GRCh38
GRCh371716,945,771 - 17,095,957 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361716,886,832 - 17,029,599 (+)NCBINCBI36Build 36hg18NCBI36
Build 341716,886,831 - 17,029,595NCBI
Celera1717,885,731 - 18,028,474 (+)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1716,699,034 - 16,848,887 (+)NCBIHuRef
CHM1_11716,955,735 - 17,105,592 (+)NCBICHM1_1
T2T-CHM13v2.01716,988,540 - 17,138,696 (+)NCBIT2T-CHM13v2.0
Mprip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391159,552,973 - 59,671,686 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1159,552,131 - 59,671,686 (+)EnsemblGRCm39 Ensembl
GRCm381159,662,470 - 59,780,862 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1159,661,305 - 59,780,860 (+)EnsemblGRCm38mm10GRCm38
MGSCv371159,475,997 - 59,594,362 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,199,112 - 60,312,802 (+)NCBIMGSCv36mm8
MGSCv361159,478,727 - 59,592,417 (+)NCBIMGSCv36mm8
Cytogenetic Map11B1.3NCBI
cM Map1137.76NCBI
Mprip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955577705,435 - 838,948 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955577705,435 - 838,948 (-)NCBIChiLan1.0ChiLan1.0
MPRIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21951,560,411 - 51,710,463 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11756,272,101 - 56,422,116 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01734,101,451 - 34,251,475 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11739,040,050 - 39,182,581 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1739,040,719 - 39,182,578 (-)Ensemblpanpan1.1panPan2
MPRIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1542,216,938 - 42,338,572 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl542,210,790 - 42,338,566 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha542,356,669 - 42,510,940 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0542,325,326 - 42,480,037 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl542,330,618 - 42,480,486 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1542,292,259 - 42,446,596 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0542,239,594 - 42,393,634 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0542,431,738 - 42,586,467 (-)NCBIUU_Cfam_GSD_1.0
Mprip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560262,003,202 - 62,109,591 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936741757,639 - 858,654 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936741757,618 - 864,051 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPRIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1261,077,628 - 61,186,129 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11261,077,617 - 61,185,906 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MPRIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11616,075,755 - 16,226,515 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1616,075,698 - 16,214,831 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660594,690,503 - 4,841,092 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mprip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248494,237,118 - 4,368,355 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248494,231,802 - 4,368,355 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mprip
334 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:408
Count of miRNA genes:194
Interacting mature miRNAs:225
Transcripts:ENSRNOT00000004357, ENSRNOT00000040865
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10538701450387014Rat
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101502851360430477Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat
6893350Bw99Body weight QTL 990.870.16body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
6893352Bw100Body weight QTL 1000.330.6body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
631532Cm50Cardiac mass QTL 506.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)101790711351786432Rat
1598852Anxrr19Anxiety related response QTL 195.07body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)101816784163167841Rat
2313055Bw96Body weight QTL 963.60.0001body mass (VT:0001259)body weight (CMO:0000012)101960648364606483Rat
2313087Bmd80Bone mineral density QTL 803.20.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)101960648364606483Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
1581497Esta1Estrogen-induced thymic atrophy QTL 1thymus mass (VT:0004954)thymus wet weight (CMO:0000855)102132980561345413Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
70224Eae3Experimental allergic encephalomyelitis QTL 34.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)102652195761345413Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat
2300171Bmd58Bone mineral density QTL 584.90.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)102694462871944628Rat
10402859Bp381Blood pressure QTL 3810.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
2292441Bp308Blood pressure QTL 308arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102845313673453136Rat
1600371Mcs21Mammary carcinoma susceptibility QTL 213mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)102887565052200160Rat
1331762Rf40Renal function QTL 403.873kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)102929950464155584Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103063205375632053Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103122402675632053Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
1576319Cia29Collagen induced arthritis QTL 29joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103397392178973921Rat
61332Eau3Experimental allergic uveoretinitis QTL 30.004uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)103449055945579777Rat
1354614Hpcl1Hepatic cholesterol level QTL 13.3liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)103539226751793994Rat
1358897Stresp6Stress response QTL 64.170.022blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)103539226764155584Rat
61441Btemp1Thermal response to stress QTL 14body temperature trait (VT:0005535)core body temperature (CMO:0001036)103539245763642539Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)103756507982565079Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)103756507982565079Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040035094102359817Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104133325886333258Rat
8552805Bw145Body weight QTL 1452.2body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)104194452678307017Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14232313287323132Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104232313287323132Rat
6893342Cm78Cardiac mass QTL 780.10.88heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)104287676679813922Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104444169989441699Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104444169989441699Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104444169989441699Rat

Markers in Region
AA874795  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21044,568,759 - 44,568,944 (+)MAPPERmRatBN7.2
Rnor_6.01046,133,222 - 46,133,406NCBIRnor6.0
Rnor_5.01045,889,714 - 45,889,898UniSTSRnor5.0
RGSC_v3.41046,090,246 - 46,090,430UniSTSRGSC3.4
Celera1043,830,617 - 43,830,801UniSTS
RH 3.4 Map10501.59UniSTS
Cytogenetic Map10q22UniSTS
AA859242  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21044,568,794 - 44,569,013 (+)MAPPERmRatBN7.2
Rnor_6.01046,133,257 - 46,133,475NCBIRnor6.0
Rnor_5.01045,889,749 - 45,889,967UniSTSRnor5.0
RGSC_v3.41046,090,281 - 46,090,499UniSTSRGSC3.4
Celera1043,830,652 - 43,830,870UniSTS
RH 3.4 Map10499.69UniSTS
Cytogenetic Map10q22UniSTS
BE111005  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21044,510,304 - 44,510,500 (+)MAPPERmRatBN7.2
Rnor_6.01046,074,772 - 46,074,967NCBIRnor6.0
Rnor_5.01045,831,264 - 45,831,459UniSTSRnor5.0
RGSC_v3.41046,031,796 - 46,031,991UniSTSRGSC3.4
Celera1043,772,176 - 43,772,371UniSTS
RH 3.4 Map10520.3UniSTS
Cytogenetic Map10q22UniSTS
BF404236  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21044,510,248 - 44,510,419 (+)MAPPERmRatBN7.2
Rnor_6.01046,074,716 - 46,074,886NCBIRnor6.0
Rnor_5.01045,831,208 - 45,831,378UniSTSRnor5.0
RGSC_v3.41046,031,740 - 46,031,910UniSTSRGSC3.4
Celera1043,772,120 - 43,772,290UniSTS
RH 3.4 Map10498.9UniSTS
Cytogenetic Map10q22UniSTS
BF411669  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21044,475,428 - 44,475,644 (+)MAPPERmRatBN7.2
Rnor_6.01046,039,898 - 46,040,113NCBIRnor6.0
Rnor_5.01045,796,390 - 45,796,605UniSTSRnor5.0
RGSC_v3.41045,996,922 - 45,997,137UniSTSRGSC3.4
Celera1043,737,588 - 43,737,803UniSTS
RH 3.4 Map10529.58UniSTS
Cytogenetic Map10q22UniSTS
RH137811  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21044,538,077 - 44,538,251 (+)MAPPERmRatBN7.2
Rnor_6.01046,102,542 - 46,102,715NCBIRnor6.0
Rnor_5.01045,859,034 - 45,859,207UniSTSRnor5.0
RGSC_v3.41046,059,566 - 46,059,739UniSTSRGSC3.4
Celera1043,799,937 - 43,800,110UniSTS
Cytogenetic Map10q22UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001034022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001371051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006246432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA924848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC097038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC123316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF311311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC098911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000004357   ⟹   ENSRNOP00000004357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1044,454,152 - 44,569,118 (+)Ensembl
Rnor_6.0 Ensembl1046,018,659 - 46,133,571 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000040865   ⟹   ENSRNOP00000045501
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1044,454,152 - 44,569,118 (+)Ensembl
Rnor_6.0 Ensembl1046,018,659 - 46,133,571 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000080666   ⟹   ENSRNOP00000069198
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1044,454,152 - 44,569,118 (+)Ensembl
Rnor_6.0 Ensembl1046,092,754 - 46,129,890 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000100281   ⟹   ENSRNOP00000084454
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1044,453,929 - 44,569,118 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000116961   ⟹   ENSRNOP00000085408
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1044,453,929 - 44,569,118 (+)Ensembl
RefSeq Acc Id: NM_001034022   ⟹   NP_001029194
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,500 - 45,073,388 (+)NCBI
mRatBN7.21044,453,949 - 44,573,843 (+)NCBI
Rnor_6.01046,018,659 - 46,133,577 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
RGSC_v3.41045,975,683 - 46,090,601 (+)RGD
Celera1043,716,586 - 43,830,972 (+)RGD
Sequence:
RefSeq Acc Id: NM_001371051   ⟹   NP_001357980
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,500 - 45,073,388 (+)NCBI
mRatBN7.21044,453,949 - 44,573,843 (+)NCBI
RefSeq Acc Id: NM_001414223   ⟹   NP_001401152
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,500 - 45,073,388 (+)NCBI
mRatBN7.21044,453,949 - 44,573,843 (+)NCBI
RefSeq Acc Id: NM_053814   ⟹   NP_446266
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,500 - 45,073,388 (+)NCBI
mRatBN7.21044,453,949 - 44,573,843 (+)NCBI
Rnor_6.01046,018,659 - 46,133,577 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
RGSC_v3.41045,975,683 - 46,090,601 (+)RGD
Celera1043,716,586 - 43,830,972 (+)RGD
Sequence:
RefSeq Acc Id: XM_006246424   ⟹   XP_006246486
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,472 - 45,068,145 (+)NCBI
mRatBN7.21044,453,954 - 44,569,118 (+)NCBI
Rnor_6.01046,018,398 - 46,133,580 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006246425   ⟹   XP_006246487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
mRatBN7.21044,453,956 - 44,569,118 (+)NCBI
Rnor_6.01046,018,399 - 46,133,580 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006246427   ⟹   XP_006246489
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
mRatBN7.21044,453,955 - 44,569,118 (+)NCBI
Rnor_6.01046,018,399 - 46,133,580 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006246431   ⟹   XP_006246493
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
mRatBN7.21044,454,158 - 44,569,442 (+)NCBI
Rnor_6.01046,018,627 - 46,133,574 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006246432   ⟹   XP_006246494
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
mRatBN7.21044,453,959 - 44,569,118 (+)NCBI
Rnor_6.01046,018,417 - 46,133,580 (+)NCBI
Rnor_5.01045,775,202 - 45,890,071 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017596957   ⟹   XP_017452446
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
mRatBN7.21044,453,959 - 44,569,118 (+)NCBI
Rnor_6.01046,018,416 - 46,133,580 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039085047   ⟹   XP_038940975
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81045,030,298 - 45,065,090 (+)NCBI
mRatBN7.21044,532,665 - 44,569,118 (+)NCBI
RefSeq Acc Id: XM_063268288   ⟹   XP_063124358
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,472 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268289   ⟹   XP_063124359
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268290   ⟹   XP_063124360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268291   ⟹   XP_063124361
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,472 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268292   ⟹   XP_063124362
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,472 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268293   ⟹   XP_063124363
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81045,030,298 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268294   ⟹   XP_063124364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268295   ⟹   XP_063124365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
RefSeq Acc Id: XM_063268296   ⟹   XP_063124366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268297   ⟹   XP_063124367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,145 (+)NCBI
RefSeq Acc Id: XM_063268298   ⟹   XP_063124368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
RefSeq Acc Id: XM_063268299   ⟹   XP_063124369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,065,090 (+)NCBI
RefSeq Acc Id: XM_063268300   ⟹   XP_063124370
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,145 (+)NCBI
RefSeq Acc Id: XM_063268301   ⟹   XP_063124371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81044,953,473 - 45,068,663 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001029194 (Get FASTA)   NCBI Sequence Viewer  
  NP_001357980 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401152 (Get FASTA)   NCBI Sequence Viewer  
  NP_446266 (Get FASTA)   NCBI Sequence Viewer  
  XP_006246486 (Get FASTA)   NCBI Sequence Viewer  
  XP_006246487 (Get FASTA)   NCBI Sequence Viewer  
  XP_006246489 (Get FASTA)   NCBI Sequence Viewer  
  XP_006246493 (Get FASTA)   NCBI Sequence Viewer  
  XP_006246494 (Get FASTA)   NCBI Sequence Viewer  
  XP_017452446 (Get FASTA)   NCBI Sequence Viewer  
  XP_038940975 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124358 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124359 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124360 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124361 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124362 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124363 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124364 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124365 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124366 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124367 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124368 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124369 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124370 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124371 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG23699 (Get FASTA)   NCBI Sequence Viewer  
  AAH98911 (Get FASTA)   NCBI Sequence Viewer  
  EDM04620 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000004357
  ENSRNOP00000004357.7
  ENSRNOP00000045501
  ENSRNOP00000045501.4
  ENSRNOP00000069198
  ENSRNOP00000069198.2
  ENSRNOP00000084454
  ENSRNOP00000084454.1
  ENSRNOP00000085408.1
GenBank Protein Q9ERE6 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_446266   ⟸   NM_053814
- Peptide Label: isoform 2
- UniProtKB: Q4KM03 (UniProtKB/Swiss-Prot),   Q9ERE6 (UniProtKB/Swiss-Prot),   A6HF15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001029194   ⟸   NM_001034022
- Peptide Label: isoform 3
- UniProtKB: Q4KM03 (UniProtKB/Swiss-Prot),   Q9ERE6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006246493   ⟸   XM_006246431
- Peptide Label: isoform X11
- UniProtKB: Q9ERE6 (UniProtKB/Swiss-Prot),   Q4KM03 (UniProtKB/Swiss-Prot),   G3V9F3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006246486   ⟸   XM_006246424
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZXY0 (UniProtKB/TrEMBL),   A0A8I6A006 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006246487   ⟸   XM_006246425
- Peptide Label: isoform X4
- UniProtKB: A0A0G2JUR5 (UniProtKB/TrEMBL),   A0A8I6A006 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006246494   ⟸   XM_006246432
- Peptide Label: isoform X14
- UniProtKB: Q9ERE6 (UniProtKB/Swiss-Prot),   Q4KM03 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006246489   ⟸   XM_006246427
- Peptide Label: isoform X7
- UniProtKB: A0A140TA95 (UniProtKB/TrEMBL),   A0A8I6A006 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017452446   ⟸   XM_017596957
- Peptide Label: isoform X18
- UniProtKB: Q9ERE6 (UniProtKB/Swiss-Prot),   Q4KM03 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069198   ⟸   ENSRNOT00000080666
RefSeq Acc Id: ENSRNOP00000004357   ⟸   ENSRNOT00000004357
RefSeq Acc Id: ENSRNOP00000045501   ⟸   ENSRNOT00000040865
RefSeq Acc Id: NP_001357980   ⟸   NM_001371051
- Peptide Label: isoform 1
- UniProtKB: A0A8I5ZXY0 (UniProtKB/TrEMBL),   A0A8I6A006 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940975   ⟸   XM_039085047
- Peptide Label: isoform X9
RefSeq Acc Id: ENSRNOP00000085408   ⟸   ENSRNOT00000116961
RefSeq Acc Id: ENSRNOP00000084454   ⟸   ENSRNOT00000100281
RefSeq Acc Id: NP_001401152   ⟸   NM_001414223
- Peptide Label: isoform 4
RefSeq Acc Id: XP_063124358   ⟸   XM_063268288
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063124361   ⟸   XM_063268291
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063124362   ⟸   XM_063268292
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063124365   ⟸   XM_063268295
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063124368   ⟸   XM_063268298
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063124371   ⟸   XM_063268301
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063124367   ⟸   XM_063268297
- Peptide Label: isoform X15
- UniProtKB: A6HF15 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063124370   ⟸   XM_063268300
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063124364   ⟸   XM_063268294
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063124359   ⟸   XM_063268289
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063124366   ⟸   XM_063268296
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063124360   ⟸   XM_063268290
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063124369   ⟸   XM_063268299
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063124363   ⟸   XM_063268293
- Peptide Label: isoform X9
Protein Domains
PH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ERE6-F1-model_v2 AlphaFold Q9ERE6 1-1029 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697238
Promoter ID:EPDNEW_R7762
Type:initiation region
Name:Mprip_1
Description:myosin phosphatase Rho interacting protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R7763  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01046,018,621 - 46,018,681EPDNEW
RGD ID:13697242
Promoter ID:EPDNEW_R7763
Type:single initiation site
Name:Mprip_2
Description:myosin phosphatase Rho interacting protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R7762  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01046,092,833 - 46,092,893EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:619947 AgrOrtholog
BioCyc Gene G2FUF-24880 BioCyc
Ensembl Genes ENSRNOG00000003226 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000004357.8 UniProtKB/TrEMBL
  ENSRNOT00000040865.7 UniProtKB/TrEMBL
  ENSRNOT00000080666.2 UniProtKB/TrEMBL
  ENSRNOT00000100281 ENTREZGENE
  ENSRNOT00000100281.1 UniProtKB/TrEMBL
  ENSRNOT00000116961.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7446349 IMAGE-MGC_LOAD
InterPro M-RIP_PH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:116504 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:114284 IMAGE-MGC_LOAD
NCBI Gene 116504 ENTREZGENE
PANTHER MYOSIN PHOSPHATASE RHO-INTERACTING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PF00169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mprip PhenoGen
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003226 RatGTEx
SMART SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JUR5 ENTREZGENE, UniProtKB/TrEMBL
  A0A140TA95 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZXY0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A006 ENTREZGENE, UniProtKB/TrEMBL
  A6HF15 ENTREZGENE, UniProtKB/TrEMBL
  G3V9F3 ENTREZGENE, UniProtKB/TrEMBL
  MPRIP_RAT UniProtKB/Swiss-Prot
  Q4KM03 ENTREZGENE
  Q9ERE6 ENTREZGENE
UniProt Secondary Q4KM03 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-23 Mprip  myosin phosphatase Rho interacting protein  M-rip  myosin phosphatase-Rho interacting protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-22 M-rip  myosin phosphatase-Rho interacting protein  Mrip  myosin phosphatase-Rho interacting protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 Mrip  myosin phosphatase-Rho interacting protein  Rhoip3  Rho interacting protein 3  Symbol and Name updated 1299863 APPROVED
2002-08-07 Rhoip3  Rho interacting protein 3      Symbol and Name status set to provisional 70820 PROVISIONAL