Gene: Pabpc1 (poly(A) binding protein, cytoplasmic 1) Rattus norvegicus
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Symbol: Pabpc1
Name: poly(A) binding protein, cytoplasmic 1
Description: ENCODES a protein that exhibits mRNA binding; mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN gene silencing by RNA (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); PARTICIPATES IN microRNA pathway; translation initiation pathway; mRNA decay pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Carcinoma, Transitional Cell (ortholog); transitional cell carcinoma (ortholog); FOUND IN dendrite; messenger ribonucleoprotein complex; catalytic step 2 spliceosome (ortholog); INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,4-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC91496; Pabp; PABP 1; PABP-1; Pabp1; poly(A)-binding protein 1; polyadenylate-binding protein 1
Orthologs:
Homo sapiens (human) : PABPC1 (poly(A) binding protein cytoplasmic 1)  HGNC  AGR
Mus musculus (house mouse) : Pabpc1 (poly(A) binding protein, cytoplasmic 1)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Pabpc1 (poly(A) binding protein cytoplasmic 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PABPC1 (poly(A) binding protein cytoplasmic 1)
Canis lupus familiaris (dog) : PABPC1 (poly(A) binding protein cytoplasmic 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pabpc1 (poly(A) binding protein cytoplasmic 1)
more info ...
Related Pseudogenes: Pabpc1-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0775,409,581 - 75,421,874 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0775,557,634 - 75,569,927 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4772,116,140 - 72,128,433 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1772,136,510 - 72,149,407 (-)NCBI
Celera764,857,404 - 64,869,695 (-)NCBI
Cytogenetic Map7q22NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pabpc1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
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RGD Object Information
RGD ID: 619838
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2017-11-07
Status: ACTIVE