Ocm (oncomodulin) - Rat Genome Database

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Gene: Ocm (oncomodulin) Rattus norvegicus
Analyze
Symbol: Ocm
Name: oncomodulin
RGD ID: 3222
Description: Enables calcium ion binding activity and protein homodimerization activity. Involved in cochlea development and response to wounding. Located in several cellular components, including cuticular plate; extracellular space; and stereocilium. Part of protein-containing complex. Orthologous to several human genes including OCM2 (oncomodulin 2); PARTICIPATES IN calcium/calcium-mediated signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 5-aza-2'-deoxycytidine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Ocm2; OM; oncmodulin; oncomodulin 2; parvalbumin beta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,649,452 - 15,710,375 (+)NCBIGRCr8
mRatBN7.21210,535,619 - 10,596,705 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,586,897 - 10,596,707 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,393,448 - 11,403,130 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01212,016,733 - 12,026,415 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,040,043 - 11,050,658 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,611,121 - 12,634,472 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,624,723 - 12,634,472 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01214,619,319 - 14,678,847 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41210,916,095 - 10,925,595 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11210,946,022 - 10,955,523 (+)NCBI
Celera1212,384,375 - 12,394,039 (+)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structure of oncomodulin refined at 1.85 A resolution. An example of extensive molecular aggregation via Ca2+. Ahmed FR, etal., J Mol Biol. 1990 Nov 5;216(1):127-40.
2. Refinement of recombinant oncomodulin at 1.30 A resolution. Ahmed FR, etal., J Mol Biol. 1993 Apr 20;230(4):1216-24.
3. Retroviral long terminal repeat is the promoter of the gene encoding the tumor-associated calcium-binding protein oncomodulin in the rat. Banville D and Boie Y, J Mol Biol 1989 Jun 5;207(3):481-90.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. A complete complementary DNA for the oncodevelopmental calcium-binding protein, oncomodulin. Gillen MF, etal., J Biol Chem 1987 Apr 15;262(11):5308-12.
6. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
7. The concentrations of calcium buffering proteins in mammalian cochlear hair cells. Hackney CM, etal., J Neurosci. 2005 Aug 24;25(34):7867-75.
8. Solution structure of Ca2+-free rat beta-parvalbumin (oncomodulin). Henzl MT and Tanner JJ, Protein Sci. 2007 Sep;16(9):1914-26. doi: 10.1110/ps.072837307.
9. Association of the AB and CD-EF domains from rat alpha- and beta-parvalbumin. Henzl MT, etal., Biochemistry. 2004 Aug 31;43(34):10906-17.
10. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
11. Metal-controlled interdomain cooperativity in parvalbumins. Permyakov SE, etal., Cell Calcium. 2009 Sep;46(3):163-75. Epub 2009 Aug 3.
12. GOA pipeline RGD automated data pipeline
13. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Cytosolic Ca2+ buffers. Schwaller B, Cold Spring Harb Perspect Biol. 2010 Nov;2(11):a004051. doi: 10.1101/cshperspect.a004051. Epub 2010 Oct 13.
16. Oncomodulin is a macrophage-derived signal for axon regeneration in retinal ganglion cells. Yin Y, etal., Nat Neurosci. 2006 Jun;9(6):843-52. Epub 2006 May 14.
Additional References at PubMed
PMID:3571255   PMID:6617664   PMID:14978725   PMID:19075559   PMID:33419032  


Genomics

Comparative Map Data
Ocm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,649,452 - 15,710,375 (+)NCBIGRCr8
mRatBN7.21210,535,619 - 10,596,705 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,586,897 - 10,596,707 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,393,448 - 11,403,130 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01212,016,733 - 12,026,415 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,040,043 - 11,050,658 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,611,121 - 12,634,472 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,624,723 - 12,634,472 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01214,619,319 - 14,678,847 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41210,916,095 - 10,925,595 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11210,946,022 - 10,955,523 (+)NCBI
Celera1212,384,375 - 12,394,039 (+)NCBICelera
Cytogenetic Map12p11NCBI
OCM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3875,859,718 - 5,886,363 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl75,879,827 - 5,886,363 (+)EnsemblGRCh38hg38GRCh38
GRCh3775,899,349 - 5,925,994 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3675,886,955 - 5,892,520 (+)NCBINCBI36Build 36hg18NCBI36
Build 34797,258,662 - 97,264,067NCBI
Celera75,879,996 - 5,885,563 (+)NCBICelera
Cytogenetic Map7p22.1NCBI
HuRef75,831,808 - 5,837,381 (+)NCBIHuRef
CHM1_175,919,985 - 5,925,547 (+)NCBICHM1_1
T2T-CHM13v2.075,977,469 - 6,004,117 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v275,966,774 - 5,972,339 (+)NCBI
Ocm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395143,956,615 - 143,987,691 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5143,956,622 - 143,963,488 (-)EnsemblGRCm39 Ensembl
GRCm385144,019,807 - 144,050,640 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5144,019,804 - 144,026,670 (-)EnsemblGRCm38mm10GRCm38
MGSCv375144,780,676 - 144,811,478 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365144,273,334 - 144,304,136 (-)NCBIMGSCv36mm8
Celera5141,002,113 - 141,033,119 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map582.85NCBI
Ocm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495546013,876,279 - 13,880,643 (-)NCBIChiLan1.0ChiLan1.0
OCM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2610,775,792 - 10,826,576 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1759,100,497 - 59,151,284 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v076,066,257 - 6,126,400 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.176,089,803 - 6,114,752 (+)NCBIpanpan1.1PanPan1.1panPan2
OCM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.135,239,438 - 5,245,329 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.235,300,189 - 5,306,245 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Ocm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474031,461,266 - 31,465,473 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474031,461,152 - 31,581,141 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ocm
840 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:174
Count of miRNA genes:126
Interacting mature miRNAs:139
Transcripts:ENSRNOT00000043439
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 3 1 7 18 18 16 7
Below cutoff 1 14 13 13 4 4 40 14 19 3 4

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000043439   ⟹   ENSRNOP00000040755
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1212,628,551 - 12,634,465 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000092601   ⟹   ENSRNOP00000075788
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1210,586,897 - 10,596,707 (+)Ensembl
Rnor_6.0 Ensembl1212,624,723 - 12,634,472 (+)Ensembl
RefSeq Acc Id: NM_012995   ⟹   NP_037127
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,700,626 - 15,710,375 (+)NCBI
mRatBN7.21210,586,956 - 10,596,705 (+)NCBI
Rnor_6.01212,624,723 - 12,634,472 (+)NCBI
Rnor_5.01214,619,319 - 14,678,847 (+)NCBI
RGSC_v3.41210,916,095 - 10,925,595 (+)RGD
Celera1212,384,375 - 12,394,039 (+)RGD
Sequence:
RefSeq Acc Id: XM_006248852   ⟹   XP_006248914
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,687,066 - 15,710,373 (+)NCBI
mRatBN7.21210,573,391 - 10,596,703 (+)NCBI
Rnor_6.01212,611,121 - 12,634,470 (+)NCBI
Rnor_5.01214,619,319 - 14,678,847 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063271083   ⟹   XP_063127153
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,649,453 - 15,710,373 (+)NCBI
RefSeq Acc Id: XM_063271084   ⟹   XP_063127154
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,649,452 - 15,710,373 (+)NCBI
RefSeq Acc Id: XM_063271085   ⟹   XP_063127155
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81215,687,073 - 15,710,373 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_037127   ⟸   NM_012995
- UniProtKB: P02631 (UniProtKB/Swiss-Prot),   A6K1I3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006248914   ⟸   XM_006248852
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSRNOP00000040755   ⟸   ENSRNOT00000043439
RefSeq Acc Id: ENSRNOP00000075788   ⟸   ENSRNOT00000092601
RefSeq Acc Id: XP_063127154   ⟸   XM_063271084
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063127153   ⟸   XM_063271083
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063127155   ⟸   XM_063271085
- Peptide Label: isoform X2
Protein Domains
EF-hand

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P02631-F1-model_v2 AlphaFold P02631 1-109 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698429
Promoter ID:EPDNEW_R8954
Type:single initiation site
Name:Ocm2_1
Description:oncomodulin 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01212,624,695 - 12,624,755EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:3222 AgrOrtholog
BioCyc Gene G2FUF-20029 BioCyc
Ensembl Genes ENSRNOG00000001031 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055011314 UniProtKB/Swiss-Prot
  ENSRNOG00060027225 UniProtKB/Swiss-Prot
  ENSRNOG00065000115 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000092601 ENTREZGENE
  ENSRNOT00000092601.2 UniProtKB/Swiss-Prot
  ENSRNOT00055019164 UniProtKB/Swiss-Prot
  ENSRNOT00060047223 UniProtKB/Swiss-Prot
  ENSRNOT00065000197 UniProtKB/Swiss-Prot
Gene3D-CATH EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Parvalbumin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25503 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 25503 ENTREZGENE
PANTHER ONCOMODULIN-2-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARVALBUMIN ALPHA UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
Pfam EF-hand_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ocm PhenoGen
PRINTS PARVALBUMIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001031 RatGTEx
  ENSRNOG00055011314 RatGTEx
  ENSRNOG00060027225 RatGTEx
  ENSRNOG00065000115 RatGTEx
SMART EFh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP EF-hand UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A6K1I3 ENTREZGENE, UniProtKB/TrEMBL
  ONCO_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-05 Ocm  oncomodulin  Ocm2  oncomodulin 2  Name and Symbol changed 629549 APPROVED
2013-02-27 Ocm2  oncomodulin 2  Ocm  oncomodulin  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Ocm  Oncomodulin      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_disease expression activated in many tumors 729147
gene_expression expressed only in extra-embryonic tissues such as the placenta 729147