CSGALNACT2P1 (CSGALNACT2 pseudogene 1) - Rat Genome Database

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Gene: CSGALNACT2P1 (CSGALNACT2 pseudogene 1) Homo sapiens
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Symbol: CSGALNACT2P1
Name: CSGALNACT2 pseudogene 1
RGD ID: 2903113
HGNC Page HGNC:55033
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: chondroitin beta1,4 N-acetylgalactosaminyltransferase (ChGn) pseudogene; chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene; LOC286453; Z97985.1
Related Functional Gene: CSGALNACT2  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X100,956,587 - 100,957,736 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX100,956,593 - 100,957,538 (+)EnsemblGRCh38hg38GRCh38
GRCh37X100,211,576 - 100,212,725 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X100,098,591 - 100,099,530 (+)NCBINCBI36Build 36hg18NCBI36
CeleraX100,730,380 - 100,731,324 (+)NCBICelera
Cytogenetic MapXq22.1NCBI
HuRefX90,009,546 - 90,010,490 (+)NCBIHuRef
CHM1_1X100,104,520 - 100,105,464 (+)NCBICHM1_1
T2T-CHM13v2.0X99,399,271 - 99,400,421 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Markers in Region
RH93061  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X100,194,711 - 100,194,896UniSTSGRCh37
Build 36X100,081,367 - 100,081,552RGDNCBI36
CeleraX100,713,510 - 100,713,695RGD
Cytogenetic MapXq22.1UniSTS
HuRefX89,992,714 - 89,992,899UniSTS
GeneMap99-GB4 RH MapX272.95UniSTS
DXS9781  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X100,190,072 - 100,190,207UniSTSGRCh37
Build 36X100,076,728 - 100,076,863RGDNCBI36
CeleraX100,708,871 - 100,709,006RGD
Cytogenetic MapXq22.1UniSTS
HuRefX89,988,343 - 89,988,478UniSTS
GeneMap99-G3 RH MapX3233.0UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENST00000332270
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX100,956,593 - 100,957,538 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC CSGALNACT2P1 COSMIC
Ensembl Genes ENSG00000182574 Ensembl, ENTREZGENE
GTEx ENSG00000182574 GTEx
HGNC ID HGNC:55033 ENTREZGENE
Human Proteome Map CSGALNACT2P1 Human Proteome Map
NCBI Gene 286453 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-07 CSGALNACT2P1  CSGALNACT2 pseudogene 1  Z97985.1  chondroitin beta1,4 N-acetylgalactosaminyltransferase (ChGn) pseudogene  Data merged from RGD:16550880 737654 PROVISIONAL
2020-06-01 CSGALNACT2P1  CSGALNACT2 pseudogene 1  LOC286453  chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene  Symbol and/or name change 19259463 PROVISIONAL
2012-06-27 LOC286453  chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene  dJ341D10.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene  Symbol and/or name change 5135510 APPROVED
2011-10-11 dJ341D10.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene  dJ341D10.1  chondroitin beta1,4 N-acetylgalactosaminyltransferase (ChGn) pseudogene  Symbol and/or name change 5135510 APPROVED