Gene: Clcn5 (chloride voltage-gated channel 5) Rattus norvegicus
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Symbol: Clcn5
Name: chloride voltage-gated channel 5
Description: ENCODES a protein that exhibits voltage-gated chloride channel activity; INVOLVED IN chloride transport; endocytosis (ortholog); ASSOCIATED WITH Renal Tubular Transport, Inborn Errors; Dent Disease (ortholog); Dent Disease 1 (ortholog); FOUND IN endosome; membrane; apical part of cell (ortholog); INTERACTS WITH ammonium chloride; beta-naphthoflavone; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chloride channel 5; chloride channel protein 5; chloride channel, voltage-sensitive 5; chloride transporter ClC-5; clC-5; CLC5; h(+)/Cl(-) exchange transporter 5
Orthologs:
Homo sapiens (human) : CLCN5 (chloride voltage-gated channel 5)  HGNC
Mus musculus (house mouse) : Clcn5 (chloride channel, voltage-sensitive 5)  MGI
Pan paniscus (bonobo/pygmy chimpanzee) : CLCN5 (chloride voltage-gated channel 5)
Canis lupus familiaris (dog) : CLCN5 (chloride voltage-gated channel 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcn5 (chloride voltage-gated channel 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X16,170,585 - 16,196,691 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0X16,955,709 - 16,981,815 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4X27,383,769 - 27,409,877 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X27,437,237 - 27,463,346 (+)NCBI
CeleraX15,387,005 - 15,413,019 (+)NCBI
Cytogenetic MapXq12NCBImapview
RH 3.4 MapX169.21RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Clcn5
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
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RGD Object Information
RGD ID: 2362
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2017-03-14
Status: ACTIVE