Gene: Clcn1 (chloride voltage-gated channel 1) Rattus norvegicus
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Symbol: Clcn1
Name: chloride voltage-gated channel 1
Description: ENCODES a protein that exhibits voltage-gated chloride channel activity; protein homodimerization activity (ortholog); INVOLVED IN chloride transport; chloride transmembrane transport (ortholog); muscle contraction (ortholog); ASSOCIATED WITH Myotonia Congenita (ortholog); Myotonia Congenita, Autosomal Dominant (ortholog); FOUND IN integral component of plasma membrane (ortholog); sarcolemma (ortholog); INTERACTS WITH ammonium chloride; bisphenol A; CPP
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chloride channel 1; chloride channel 1 (skeletal muscle); chloride channel 1, skeletal muscle; chloride channel protein 1; chloride channel protein, skeletal muscle; chloride channel, voltage-sensitive 1; clC-1; SMCC
Orthologs:
Is Marker For: Strains:   WF.BBDR-(Clcn1-D4Rat228)/Wor  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0471,674,218 - 71,704,318 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.04136,479,719 - 136,509,472 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4470,052,319 - 70,081,449 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1470,328,448 - 70,357,579 (+)NCBI
Celera466,103,038 - 66,130,477 (+)NCBI
Cytogenetic Map4q23NCBImapview
RH 3.4 Map4433.61RGD
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Clcn1
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
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RGD Object Information
RGD ID: 2360
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2016-09-20
Status: ACTIVE