Sord-ps1 (sorbitol dehydrogenase, pseudogene 1) - Rat Genome Database

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Gene: Sord-ps1 (sorbitol dehydrogenase, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Sord-ps1
Name: sorbitol dehydrogenase, pseudogene 1
RGD ID: 2323032
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical LOC100363413; LOC100363413
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X117,042,916 - 117,044,319 (+)NCBIGRCr8
mRatBN7.2X112,248,482 - 112,249,885 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X119,511,923 - 119,513,326 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X119,657,467 - 119,658,870 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X11,937,091 - 11,941,028 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX111,494,298 - 111,495,701 (+)NCBICelera
Cytogenetic MapXq34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Sord-ps1
3 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1360 BioCyc
NCBI Gene 100363413 ENTREZGENE
PhenoGen Sord-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Sord-ps1  sorbitol dehydrogenase, pseudogene 1  LOC100363413  hypothetical LOC100363413  Symbol and Name Changed 1299863 APPROVED
2010-05-06 LOC100363413  hypothetical LOC100363413      Symbol and Name status set to provisional 70820 PROVISIONAL