Matr3-ps3 (matrin 3, pseudogene 3) - Rat Genome Database

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Gene: Matr3-ps3 (matrin 3, pseudogene 3) Rattus norvegicus
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Symbol: Matr3-ps3
Name: matrin 3, pseudogene 3
RGD ID: 2322306
Description:
Type: pseudo
RefSeq Status: INFERRED
Previously known as: hypothetical LOC100360347; LOC100360347
Related Functional Gene: Matr3  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8135,941,578 - 5,943,236 (+)NCBIGRCr8
mRatBN7.2135,934,235 - 5,935,893 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx135,970,024 - 5,971,682 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0137,279,350 - 7,281,008 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0135,949,508 - 5,951,166 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0138,957,478 - 8,959,136 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01314,222,794 - 14,224,450 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41325,365,360 - 25,367,457 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera136,870,779 - 6,872,437 (+)NCBICelera
Cytogenetic Map13p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Matr3-ps3
10 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13134266636Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13142356786Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_028277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-18715 BioCyc
NCBI Gene 100360347 ENTREZGENE
PhenoGen Matr3-ps3 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Matr3-ps3  matrin 3, pseudogene 3  LOC100360347  hypothetical LOC100360347  Symbol and Name Changed 1299863 APPROVED
2010-05-06 LOC100360347  hypothetical LOC100360347      Symbol and Name status set to provisional 70820 PROVISIONAL