Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | combined oxidative phosphorylation deficiency 48 | | ISO | NSUN3 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | combined oxidative phosphorylation deficiency 48 | | ISO | NSUN3 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Nsun3 (Rattus norvegicus - Norway rat) |
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NSUN3 (Homo sapiens - human) |
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Nsun3 (Mus musculus - house mouse) |
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Nsun3 (Chinchilla lanigera - long-tailed chinchilla) |
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NSUN3 (Pan paniscus - bonobo/pygmy chimpanzee) |
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NSUN3 (Canis lupus familiaris - dog) |
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Nsun3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NSUN3 (Sus scrofa - pig) |
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NSUN3 (Chlorocebus sabaeus - green monkey) |
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Nsun3 (Heterocephalus glaber - naked mole-rat) |
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Variants in Nsun3
512 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 2 | 3 | |||||||||||
Low | 3 | 41 | 52 | 36 | 19 | 36 | 7 | 8 | 72 | 35 | 38 | 11 | 7 |
Below cutoff | 2 | 5 | 5 | 5 | 1 | 2 | 1 |
RefSeq Acc Id: | ENSRNOT00000080938 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000082034 ⟹ ENSRNOP00000072492 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000088090 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000094250 ⟹ ENSRNOP00000097670 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000096476 ⟹ ENSRNOP00000088188 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001427314 ⟹ NP_001414243 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039088812 ⟹ XP_038944740 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039088814 ⟹ XP_038944742 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063270215 ⟹ XP_063126285 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270216 ⟹ XP_063126286 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270217 ⟹ XP_063126287 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270218 ⟹ XP_063126288 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270219 ⟹ XP_063126289 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270220 ⟹ XP_063126290 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270221 ⟹ XP_063126291 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270222 ⟹ XP_063126292 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270223 ⟹ XP_063126293 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063270224 ⟹ XP_063126294 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010055930 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOP00000072492 ⟸ ENSRNOT00000082034 |
RefSeq Acc Id: | XP_038944740 ⟸ XM_039088812 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8I6AS93 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038944742 ⟸ XM_039088814 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8I6AS93 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000097670 ⟸ ENSRNOT00000094250 |
RefSeq Acc Id: | ENSRNOP00000088188 ⟸ ENSRNOT00000096476 |
RefSeq Acc Id: | XP_063126285 ⟸ XM_063270215 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_063126294 ⟸ XM_063270224 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | NP_001414243 ⟸ NM_001427314 |
- UniProtKB: | A0A8I6AA97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063126290 ⟸ XM_063270220 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_063126289 ⟸ XM_063270219 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_063126293 ⟸ XM_063270223 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_063126288 ⟸ XM_063270218 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_063126286 ⟸ XM_063270216 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_063126287 ⟸ XM_063270217 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_063126291 ⟸ XM_063270221 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_063126292 ⟸ XM_063270222 |
- Peptide Label: | isoform X4 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A0A0G2K340-F1-model_v2 | AlphaFold | A0A0G2K340 | 1-307 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:2322119 | AgrOrtholog |
BioCyc Gene | G2FUF-21661 | BioCyc |
BioCyc Pathway | PWY-6829 [tRNA methylation (yeast)] | BioCyc |
BioCyc Pathway Image | PWY-6829 | BioCyc |
Ensembl Genes | ENSRNOG00000054275 | Ensembl |
ENSRNOG00000059549 | Ensembl | |
ENSRNOG00000070121 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSRNOT00000094250.1 | UniProtKB/TrEMBL |
ENSRNOT00000096476.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.40.50.150 | UniProtKB/TrEMBL |
6.20.240.40 | UniProtKB/TrEMBL | |
InterPro | MeTrfase_RsmB-F_NOP2_cat | UniProtKB/TrEMBL |
MeTrfase_RsmB/NOP2 | UniProtKB/TrEMBL | |
RCMT | UniProtKB/TrEMBL | |
SAM-dependent_MTases_sf | UniProtKB/TrEMBL | |
NCBI Gene | 100360437 | ENTREZGENE |
PANTHER | PTHR22808 | UniProtKB/TrEMBL |
TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE, MITOCHONDRIAL | UniProtKB/TrEMBL | |
Pfam | Methyltr_RsmB-F | UniProtKB/TrEMBL |
PhenoGen | Nsun3 | PhenoGen |
PRINTS | RCMTFAMILY | UniProtKB/TrEMBL |
PROSITE | SAM_MT_RSMB_NOP | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000054275 | RatGTEx |
ENSRNOG00000059549 | RatGTEx | |
ENSRNOG00000070121 | RatGTEx | |
Superfamily-SCOP | SSF53335 | UniProtKB/TrEMBL |
UniProt | A0A8I6AA97 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I6AS93 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2022-06-02 | Nsun3 | NOP2/Sun RNA methyltransferase 3 | Nsun3 | NOP2/Sun RNA methyltransferase 3 | Data merged from RGD:149736256 | 737654 | PROVISIONAL |
2021-08-09 | Nsun3 | NOP2/Sun RNA methyltransferase 3 | Symbol and Name status set to provisional | 45752 | PROVISIONAL | ||
2021-03-09 | Nsun3 | NOP2/Sun RNA methyltransferase 3 | LOC102549993 | uncharacterized LOC102549993 | Data merged from RGD:7639286 | 737654 | PROVISIONAL |
2019-04-04 | Nsun3 | NOP2/Sun RNA methyltransferase 3 | Nsun3 | NOP2/Sun RNA methyltransferase family member 3 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2015-11-30 | Nsun3 | NOP2/Sun RNA methyltransferase family member 3 | Nsun3 | NOP2/Sun domain family, member 3 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2015-07-29 | Nsun3 | NOP2/Sun domain family, member 3 | LOC679671 | similar to NOL1/NOP2/Sun domain family 3 | Data merged from RGD:1585918 | 737654 | PROVISIONAL |
2013-12-18 | LOC102549993 | uncharacterized LOC102549993 | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2012-08-07 | Nsun3 | NOP2/Sun domain family, member 3 | LOC100360437 | NOL1/NOP2/Sun domain family member 3-like | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2010-05-06 | LOC100360437 | NOL1/NOP2/Sun domain family member 3-like | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2006-11-19 | LOC679671 | similar to NOL1/NOP2/Sun domain family 3 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |