Lamtor2-ps2 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, pseudogene 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Lamtor2-ps2 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Lamtor2-ps2
Name: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, pseudogene 2
RGD ID: 2321873
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC100360584; roadblock domain-containing protein 3
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81196,910,623 - 96,911,126 (+)NCBIGRCr8
mRatBN7.21183,406,357 - 83,406,788 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01187,504,271 - 87,504,741 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01190,555,319 - 90,555,767 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,397,257 - 85,397,628 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1182,176,730 - 82,177,200 (+)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Lamtor2-ps2
2 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)115445753486241447Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)115635142486241447Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
1354593Stl12Serum triglyceride level QTL 123.36blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)116642214886241447Rat
2302043Pia27Pristane induced arthritis QTL 2718.60.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)118256654583440803Rat

Markers in Region
RH125318  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01190,555,404 - 90,555,590NCBIRnor5.0
RGSC_v3.41185,397,389 - 85,397,574UniSTSRGSC3.4
Celera1182,176,907 - 82,177,092UniSTS
Cytogenetic Map2q34UniSTS


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-20601 BioCyc
NCBI Gene 100360584 ENTREZGENE
PhenoGen Lamtor2-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Lamtor2-ps2  late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, pseudogene 2  LOC100360584  roadblock domain-containing protein 3  Symbol and Name Changed 1299863 APPROVED
2010-05-06 LOC100360584  roadblock domain-containing protein 3      Symbol and Name status set to provisional 70820 PROVISIONAL