Aktip-ps1 (AKT interacting protein, pseudogene 1) - Rat Genome Database

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Gene: Aktip-ps1 (AKT interacting protein, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Aktip-ps1
Name: AKT interacting protein, pseudogene 1
RGD ID: 2320691
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: AKT interacting protein-like; LOC100361170
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8183,699,704 - 3,703,589 (+)NCBIGRCr8
mRatBN7.2183,424,953 - 3,428,838 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0183,662,560 - 3,665,905 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0183,671,546 - 3,674,891 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,777,706 - 3,781,051 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera183,285,451 - 3,288,796 (+)NCBICelera
Cytogenetic Map18p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Aktip-ps1
64 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor surface area measurement (CMO:0002078)18224947722066430Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18224947722066430Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003751741   ⟹   XP_003751789
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.0183,673,812 - 3,674,891 (+)NCBI
RefSeq Acc Id: XM_003753025   ⟹   XP_003753073
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera183,287,717 - 3,288,796 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-8366 BioCyc
NCBI Gene 100361170 ENTREZGENE
PhenoGen Aktip-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Aktip-ps1  AKT interacting protein, pseudogene 1  LOC100361170  AKT interacting protein-like  Symbol and Name Changed 1299863 APPROVED
2010-05-05 LOC100361170  AKT interacting protein-like      Symbol and Name status set to provisional 70820 PROVISIONAL