Polr3f-ps1 (RNA polymerase III subunit F, pseudogene 1) - Rat Genome Database

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Gene: Polr3f-ps1 (RNA polymerase III subunit F, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Polr3f-ps1
Name: RNA polymerase III subunit F, pseudogene 1
RGD ID: 2319371
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: DNA-directed RNA polymerase III subunit RPC6-like; LOC100361803
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81473,451,223 - 73,454,756 (-)NCBIGRCr8
mRatBN7.21469,239,558 - 69,242,354 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01473,885,061 - 73,885,661 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01473,882,250 - 73,890,854 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41474,396,590 - 74,398,191 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1468,173,466 - 68,174,066 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Polr3f-ps1
3 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003751380   ⟹   XP_003751428
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.01473,889,686 - 73,893,883 (-)NCBI
RefSeq Acc Id: XM_003752756   ⟹   XP_003752804
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1468,173,089 - 68,177,286 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-15468 BioCyc
NCBI Gene 100361803 ENTREZGENE
PhenoGen Polr3f-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Polr3f-ps1  RNA polymerase III subunit F, pseudogene 1  LOC100361803  DNA-directed RNA polymerase III subunit RPC6-like  Symbol and Name Changed 1299863 APPROVED
2010-05-05 LOC100361803  DNA-directed RNA polymerase III subunit RPC6-like      Symbol and Name status set to provisional 70820 PROVISIONAL