Gene: Egln1-ps3 (egl-9 family hypoxia-inducible factor 1, pseudogene 3) Rattus norvegicus |
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Analyze |
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Symbol: |
Egln1-ps3 |
Name: |
egl-9 family hypoxia-inducible factor 1, pseudogene 3 |
RGD ID: |
2319102 |
Description: |
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Type: |
pseudo
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RefSeq Status: |
MODEL |
Previously known as: |
EGL nine homolog 1-like; LOC100361978 |
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 15 | 7,257,374 - 7,273,395 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 15 | 4,826,499 - 4,842,497 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 15 | 5,979,018 - 5,988,685 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 10,055,179 - 10,056,741 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 15 | 6,302,369 - 6,318,161 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 15 | 4,936,224 - 4,937,786 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | p16 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (mRatBN7.2)
1354657 | Despr13 | Despair related QTL 13 | | 0.0022 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 15 | 1 | 29912054 | Rat | 8552920 | Pigfal8 | Plasma insulin-like growth factor 1 level QTL 8 | 3 | | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 15 | 1 | 34723002 | Rat | 8694361 | Abfw6 | Abdominal fat weight QTL 6 | 10.2 | 0.001 | visceral adipose mass (VT:0010063) | abdominal fat pad weight to body weight ratio (CMO:0000095) | 15 | 1 | 34723002 | Rat | 9589149 | Insul29 | Insulin level QTL 29 | 9.06 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 15 | 1 | 34723002 | Rat | 731170 | Pur3 | Proteinuria QTL 3 | 2.3 | 0.0005 | urine protein amount (VT:0005160) | urine protein excretion rate (CMO:0000759) | 15 | 1 | 41686771 | Rat | 1641887 | Alcrsp14 | Alcohol response QTL 14 | | | response to alcohol trait (VT:0010489) | brain neurotensin receptor 1 density (CMO:0002068) | 15 | 1 | 42356671 | Rat | 2298549 | Neuinf12 | Neuroinflammation QTL 12 | 3.5 | | nervous system integrity trait (VT:0010566) | spinal cord beta-2 microglobulin mRNA level (CMO:0002125) | 15 | 1 | 55302115 | Rat | 10401805 | Kidm51 | Kidney mass QTL 51 | | | kidney mass (VT:0002707) | both kidneys wet weight (CMO:0000085) | 15 | 306329 | 45306329 | Rat | 5684946 | Bss98 | Bone structure and strength QTL 98 | 3.9 | 0.0026 | tibia strength trait (VT:1000284) | tibia ultimate force (CMO:0001734) | 15 | 1058250 | 14481294 | Rat | 1641913 | Colcr2 | Colorectal carcinoma resistance QTL 2 | 6.57 | 0.0197 | intestine integrity trait (VT:0010554) | colorectal tumor number (CMO:0001794) | 15 | 2266368 | 22711984 | Rat | 1641913 | Colcr2 | Colorectal carcinoma resistance QTL 2 | 6.57 | 0.0197 | intestine integrity trait (VT:0010554) | poorly differentiated malignant colorectal tumor number (CMO:0002076) | 15 | 2266368 | 22711984 | Rat | 738017 | Hcas7 | Hepatocarcinoma susceptibility QTL 7 | 2.91 | | liver integrity trait (VT:0010547) | liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) | 15 | 2266368 | 46921453 | Rat | |
Markers in Region
AU047360 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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Rnor_6.0 | 15 | 5,897,452 - 5,897,638 | NCBI | Rnor6.0 | Rnor_6.0 | 15 | 5,262,502 - 5,262,688 | NCBI | Rnor6.0 | Rnor_5.0 | 15 | 9,964,971 - 9,965,157 | UniSTS | Rnor5.0 | Rnor_5.0 | 15 | 9,349,078 - 9,349,264 | UniSTS | Rnor5.0 | RGSC_v3.4 | 15 | 5,670,834 - 5,671,020 | UniSTS | RGSC3.4 |
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Expression
Sequence
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2022-06-10 |
Egln1-ps3 |
egl-9 family hypoxia-inducible factor 1, pseudogene 3 |
LOC100361978 |
EGL nine homolog 1-like |
Symbol and Name Changed |
1299863 |
APPROVED |
2010-05-05 |
LOC100361978 |
EGL nine homolog 1-like |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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