Scoc-ps1 (short coiled-coil protein, pseudogene 1) - Rat Genome Database

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Gene: Scoc-ps1 (short coiled-coil protein, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Scoc-ps1
Name: short coiled-coil protein, pseudogene 1
RGD ID: 2318128
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical LOC100362460; LOC100362460
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X152,034,443 - 152,034,754 (+)NCBIGRCr8
mRatBN7.2X146,989,801 - 146,990,112 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X155,016,859 - 155,017,170 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01150,733,310 - 150,733,621 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X154,499,896 - 154,500,207 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1134,378,503 - 134,378,814 (-)NCBICelera
Cytogenetic MapXq37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-745 BioCyc
NCBI Gene 100362460 ENTREZGENE
PhenoGen Scoc-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Scoc-ps1  short coiled-coil protein, pseudogene 1  LOC100362460  hypothetical LOC100362460  Symbol and Name Changed 1299863 APPROVED
2010-05-05 LOC100362460  hypothetical LOC100362460      Symbol and Name status set to provisional 70820 PROVISIONAL