Gene: Bcat1 (branched chain amino acid transaminase 1) Rattus norvegicus
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Symbol: Bcat1
Name: branched chain amino acid transaminase 1
Description: ENCODES a protein that exhibits branched-chain-amino-acid transaminase activity; identical protein binding; INVOLVED IN branched-chain amino acid catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Brain Injuries; Cholestasis (ortholog); cholestasis (ortholog); FOUND IN cytoplasm; cytosol (ortholog); mitochondrion (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 3,3',4,4',5-pentachlorobiphenyl; 6-phenylpteridine-2,4,7-triamine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: BCAT(c); Bcatc; branched chain amino acid transaminase 1, cytosolic; branched chain aminotransferase 1, cytosolic; branched-chain-amino-acid aminotransferase, cytosolic; MGC105472
Orthologs:
Homo sapiens (human) : BCAT1 (branched chain amino acid transaminase 1)  HGNC  AGR
Mus musculus (house mouse) : Bcat1 (branched chain aminotransferase 1, cytosolic)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Bcat1 (branched chain amino acid transaminase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : BCAT1 (branched chain amino acid transaminase 1)
Canis lupus familiaris (dog) : BCAT1 (branched chain amino acid transaminase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Bcat1 (branched chain amino acid transaminase 1)
more info ...
Allele / Splice: Bcat1em2Mcwi  
Genetic Models: SS-Bcat1em2Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04179,259,305 - 179,340,021 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04243,463,299 - 243,491,574 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04243,444,839 - 243,460,481 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44182,641,517 - 182,692,917 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14182,886,640 - 182,938,041 (-)NCBI
Celera4166,483,269 - 166,533,125 (-)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Bcat1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2195
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2017-11-07
Status: ACTIVE