Pappa2 (pappalysin 2) - Rat Genome Database

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Gene: Pappa2 (pappalysin 2) Mus musculus
Analyze
Symbol: Pappa2
Name: pappalysin 2
RGD ID: 1620878
MGI Page MGI
Description: Predicted to enable metalloendopeptidase activity. Acts upstream of or within bone morphogenesis. Predicted to be located in apical plasma membrane. Predicted to be active in extracellular space. Is expressed in several structures, including alimentary system; genitourinary system; long bone; nervous system; and retina layer. Orthologous to human PAPPA2 (pappalysin 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: P; PA; PAPP-A2; pappalysin-2; Pappe; PL; PLAC3; placenta-specific 3; pregnancy-associated plasma preproprotein-A2; pregnancy-associated plasma protein-E
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,539,297 - 158,788,019 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1158,539,297 - 158,808,060 (-)EnsemblGRCm39 Ensembl
GRCm381158,711,727 - 158,960,451 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,711,727 - 158,980,490 (-)EnsemblGRCm38mm10GRCm38
MGSCv371160,641,862 - 160,887,569 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,548,404 - 160,794,115 (-)NCBIMGSCv36mm8
Celera1161,107,178 - 161,348,433 (-)NCBICelera
Cytogenetic Map1H1NCBI
cM Map168.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:6171818   PMID:9710587   PMID:10349636   PMID:10815803   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14681479   PMID:14691545   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:16702428   PMID:17541685   PMID:19474058   PMID:20642865   PMID:21267068   PMID:21586553   PMID:21677750   PMID:21873635   PMID:22407321   PMID:23457539  
PMID:24952961   PMID:24997765   PMID:26164771   PMID:26385171   PMID:26416573   PMID:29238946   PMID:30445407   PMID:30977789   PMID:31168749   PMID:32004755   PMID:33919940   PMID:34321999  
PMID:35486179  


Genomics

Comparative Map Data
Pappa2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,539,297 - 158,788,019 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1158,539,297 - 158,808,060 (-)EnsemblGRCm39 Ensembl
GRCm381158,711,727 - 158,960,451 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,711,727 - 158,980,490 (-)EnsemblGRCm38mm10GRCm38
MGSCv371160,641,862 - 160,887,569 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,548,404 - 160,794,115 (-)NCBIMGSCv36mm8
Celera1161,107,178 - 161,348,433 (-)NCBICelera
Cytogenetic Map1H1NCBI
cM Map168.49NCBI
PAPPA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381176,463,175 - 176,845,601 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1176,463,171 - 176,845,601 (+)EnsemblGRCh38hg38GRCh38
GRCh371176,432,311 - 176,814,737 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361174,698,930 - 175,078,595 (+)NCBINCBI36Build 36hg18NCBI36
Build 341173,163,963 - 173,391,617NCBI
Celera1149,542,925 - 149,922,011 (+)NCBICelera
Cytogenetic Map1q25.2NCBI
HuRef1147,658,586 - 148,038,306 (+)NCBIHuRef
CHM1_11177,856,925 - 178,236,093 (+)NCBICHM1_1
T2T-CHM13v2.01175,818,447 - 176,200,273 (+)NCBIT2T-CHM13v2.0
Pappa2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81373,407,385 - 73,683,699 (-)NCBIGRCr8
mRatBN7.21370,873,918 - 71,147,874 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1370,876,794 - 71,147,779 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01376,389,150 - 76,660,248 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1376,389,150 - 76,660,245 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01381,303,663 - 81,574,402 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41374,286,881 - 74,379,736 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1370,687,413 - 70,959,267 (-)NCBICelera
Cytogenetic Map13q22NCBI
Pappa2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540616,169,759 - 16,430,206 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540616,167,764 - 16,430,165 (+)NCBIChiLan1.0ChiLan1.0
PAPPA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2172,873,318 - 73,515,794 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1172,543,742 - 73,186,283 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01151,727,598 - 152,369,670 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11155,675,710 - 156,066,753 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1155,769,395 - 156,063,989 (+)Ensemblpanpan1.1panPan2
PAPPA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1722,769,594 - 23,038,458 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl722,772,715 - 23,036,517 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha722,294,142 - 22,562,649 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0722,516,581 - 22,785,586 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl722,519,707 - 22,982,506 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1722,422,261 - 22,697,383 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0722,522,272 - 22,790,785 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0722,665,408 - 22,932,430 (-)NCBIUU_Cfam_GSD_1.0
Pappa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934493,909,831 - 94,152,180 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648111,756,085 - 11,997,132 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648111,756,580 - 11,998,919 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAPPA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9118,365,303 - 118,635,964 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19118,362,663 - 118,635,972 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29129,893,498 - 130,286,839 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PAPPA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12552,432,178 - 52,729,671 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605554,003,379 - 54,316,468 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pappa2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247715,331,793 - 5,596,752 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247715,332,013 - 5,598,678 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pappa2
7640 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1665
Count of miRNA genes:711
Interacting mature miRNAs:922
Transcripts:ENSMUST00000159860, ENSMUST00000159861, ENSMUST00000159892, ENSMUST00000160206, ENSMUST00000161589, ENSMUST00000177789
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122027729164827569Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129130858163130993Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131156308165139464Mouse
14746980Manh50_mmandible shape 50 (mouse)1134131564168131564Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135794822169795012Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1135877901169878015Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136209950170210094Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139452188173452308Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139602037173602216Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139602037173602216Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139602037173602216Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139602037173602216Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139602037173602216Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139602037173602216Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141095010175095156Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141233173175233272Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141233173175233272Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141233173175233272Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141233173175233272Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142489543176489734Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143284665177284803Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144449142178449142Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144531347178531592Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145145207179145325Mouse
1301818Ap1q_malcohol preference 1 QTL (mouse)Not determined1146908199167586222Mouse
1357567Nidd3k_mNidd3 on KK-A<y> (mouse)Not determined7147125258169038913Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147125258171632257Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147125258182873798Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147125258188983224Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9147875502181875616Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1147875502181875616Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150193673188359312Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150193673188359312Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150193673188359312Mouse
12903996Cfq5_mconditioned fear QTL 5 (mouse)1150606337159307464Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150756737184756922Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151186243185186402Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined151835111185835280Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152038741186038913Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152038741186038913Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152038741186038913Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152038741186038913Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152038741186038913Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152132744186132744Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152794822186438620Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153557406175468938Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153675990187676105Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153712853187712853Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154410512188410512Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155002940189002940Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155002940189002940Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155002940189002940Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155525623189527533Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155582237185994196Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155716221189716369Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155716221189716369Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155716221189716369Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155721528189722608Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1155831765189831892Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined155831765189831892Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1155831765189831892Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1155831765189831892Mouse
1300611Tlln_mtail length (mouse)Not determined1155837814159390372Mouse
4141075Bmd1a_mbone mineral density 1a (mouse)Not determined1155837814162145325Mouse
13452393Ity3b_mimmunity to S. typhimurium 3b (mouse)1156497439172097436Mouse
13452394Leusq1_mleucocytosis susceptibility QTL 1 (mouse)1156602037168186402Mouse
1301232Hcs7_mhepatocarcinogenesis susceptibility 7 (mouse)Not determined1156602037168186402Mouse
13452397Leusq4_mleucocytosis susceptibility QTL 4 (mouse)1156602037170803640Mouse
12910521Scgq1_mspontaneous crescentic glomerulonephritis QTL 1 (mouse)1156602037176262693Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156602037189303617Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156602037189303617Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157456299191456436Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157456299191456436Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157456299191456436Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157456299191456436Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157456299191456436Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157456299191456436Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157456299191456436Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158468817192468938Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158468817192468938Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158468817192468938Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158468817192468938Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158468817192468938Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158468817192468938Mouse

Markers in Region
Pappa2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H1UniSTS
cM Map168.49UniSTS
Pappa2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000159860
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1158,641,844 - 158,672,602 (-)Ensembl
GRCm38.p6 Ensembl1158,814,274 - 158,845,032 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159861   ⟹   ENSMUSP00000124022
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1158,539,297 - 158,785,937 (-)Ensembl
GRCm38.p6 Ensembl1158,711,727 - 158,958,367 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159892
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1158,785,697 - 158,808,060 (-)Ensembl
GRCm38.p6 Ensembl1158,958,127 - 158,980,490 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160206
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1158,656,226 - 158,666,129 (-)Ensembl
GRCm38.p6 Ensembl1158,828,656 - 158,838,559 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161589   ⟹   ENSMUSP00000124316
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1158,592,655 - 158,642,039 (-)Ensembl
GRCm38.p6 Ensembl1158,765,085 - 158,814,469 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1158,785,646 - 158,787,951 (-)Ensembl
GRCm38.p6 Ensembl1158,958,076 - 158,960,381 (-)Ensembl
RefSeq Acc Id: NM_001085376   ⟹   NP_001078845
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,539,303 - 158,785,745 (-)NCBI
GRCm381158,711,733 - 158,958,175 (-)NCBI
MGSCv371160,641,862 - 160,887,569 (-)RGD
Celera1161,107,178 - 161,348,433 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006496824   ⟹   XP_006496887
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,539,297 - 158,788,019 (-)NCBI
GRCm381158,711,727 - 158,960,451 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164644   ⟹   XP_036020537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,539,297 - 158,788,019 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001078845 (Get FASTA)   NCBI Sequence Viewer  
  XP_006496887 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020537 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH94560 (Get FASTA)   NCBI Sequence Viewer  
  BAC39093 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000124022
  ENSMUSP00000124022.3
  ENSMUSP00000124316.3
Reference Protein Sequences
RefSeq Acc Id: NP_001078845   ⟸   NM_001085376
- Peptide Label: precursor
- UniProtKB: E9PZ87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496887   ⟸   XM_006496824
- Peptide Label: isoform X1
- UniProtKB: E9PZ87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000124022   ⟸   ENSMUST00000159861
RefSeq Acc Id: ENSMUSP00000124316   ⟸   ENSMUST00000161589
RefSeq Acc Id: XP_036020537   ⟸   XM_036164644
- Peptide Label: isoform X1
- UniProtKB: E9PZ87 (UniProtKB/TrEMBL)
Protein Domains
LamG-like jellyroll fold   LNR   Sushi

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PZ87-F1-model_v2 AlphaFold E9PZ87 1-1789 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3051647 AgrOrtholog
Ensembl Genes ENSMUSG00000073530 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000159861 ENTREZGENE
  ENSMUST00000159861.9 UniProtKB/TrEMBL
  ENSMUST00000161589.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.200 UniProtKB/TrEMBL
  3.40.390.10 UniProtKB/TrEMBL
  4.10.470.20 UniProtKB/TrEMBL
  Complement Module, domain 1 UniProtKB/TrEMBL
InterPro ConA-like_subgrp UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  LamG-like UniProtKB/TrEMBL
  MetalloPept_cat_dom UniProtKB/TrEMBL
  Myxo_disulph_rpt UniProtKB/TrEMBL
  Notch_dom UniProtKB/TrEMBL
  PAPPA/PAPPA2 UniProtKB/TrEMBL
  Peptidase_M43 UniProtKB/TrEMBL
  Sushi/SCR/CCP_sf UniProtKB/TrEMBL
  Sushi_SCR_CCP UniProtKB/TrEMBL
KEGG Report mmu:23850 UniProtKB/TrEMBL
MGD MGI:3051647 ENTREZGENE
NCBI Gene 23850 ENTREZGENE
PANTHER PTHR46130 UniProtKB/TrEMBL
  PTHR46130:SF1 UniProtKB/TrEMBL
Pfam Laminin_G_3 UniProtKB/TrEMBL
  Notch UniProtKB/TrEMBL
  Peptidase_M43 UniProtKB/TrEMBL
  Sushi UniProtKB/TrEMBL
PhenoGen Pappa2 PhenoGen
PROSITE SUSHI UniProtKB/TrEMBL
SMART CCP UniProtKB/TrEMBL
  LamGL UniProtKB/TrEMBL
  SM00004 UniProtKB/TrEMBL
Superfamily-SCOP Complement_control_module UniProtKB/TrEMBL
  ConA_like_lec_gl UniProtKB/TrEMBL
  Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF49265 UniProtKB/TrEMBL
UniProt E9PZ87 ENTREZGENE, UniProtKB/TrEMBL
  F6TFC9_MOUSE UniProtKB/TrEMBL
  Q505G3_MOUSE UniProtKB/TrEMBL
  Q8BJG6_MOUSE UniProtKB/TrEMBL