Mylk (myosin, light polypeptide kinase) - Rat Genome Database

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Gene: Mylk (myosin, light polypeptide kinase) Mus musculus
Analyze
Symbol: Mylk
Name: myosin, light polypeptide kinase
RGD ID: 1616651
MGI Page MGI
Description: Enables enzyme binding activity. Involved in tonic smooth muscle contraction. Acts upstream of or within cellular response to calcium ion; cellular response to potassium ion; and cellular response to xenobiotic stimulus. Located in cell-cell junction. Is expressed in several structures, including central nervous system; heart; liver; and retina. Human ortholog(s) of this gene implicated in adult respiratory distress syndrome; asthma; coronary artery disease; megacystis-microcolon-intestinal hypoperistalsis syndrome; and thoracic aortic aneurysm. Orthologous to human MYLK (myosin light chain kinase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9530072E15Rik; A930019C19Rik; AW489456; kinase-related protein; KRP; Mlc; Mlck; MLCK10; MLCK108; MLCK21; MLCK210; myosin light chain kinase, smooth muscle; nmMl; nmMlck; smMLCK; tel; telokin
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391634,565,569 - 34,822,806 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1634,565,580 - 34,822,790 (+)EnsemblGRCm39 Ensembl
GRCm381634,745,199 - 35,002,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1634,745,210 - 35,002,420 (+)EnsemblGRCm38mm10GRCm38
MGSCv371634,785,036 - 35,002,520 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361634,704,668 - 34,920,359 (+)NCBIMGSCv36mm8
Celera1635,252,169 - 35,470,294 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1624.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP,ISO)
1,3-dinitrobenzene  (ISO)
1,4-dithiothreitol  (ISO)
1-octadec-9-enoylglycero-3-phosphate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-methoxyethanol  (ISO)
3-methylcholanthrene  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
acrolein  (ISO)
acrylamide  (ISO)
actinomycin D  (ISO)
afimoxifene  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (EXP,ISO)
belinostat  (ISO)
Benoxacor  (EXP)
benzo[a]pyrene  (EXP,ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bucladesine  (ISO)
butanal  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP)
caffeine  (ISO)
calcitriol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
captan  (EXP)
carbachol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlordecone  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (ISO)
curcumin  (EXP,ISO)
cycloheximide  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (EXP,ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (EXP,ISO)
dimethylarsinous acid  (ISO)
dioxygen  (EXP)
disulfiram  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
emodin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethanol  (ISO)
fenofibrate  (ISO)
folic acid  (EXP)
folpet  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
ginsenoside Re  (ISO)
glafenine  (ISO)
glucose  (EXP,ISO)
hydrogen peroxide  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
L-1,4-dithiothreitol  (ISO)
lipopolysaccharide  (EXP,ISO)
loperamide  (EXP)
losartan  (ISO)
luteolin  (ISO)
medroxyprogesterone acetate  (ISO)
menadione  (ISO)
mercury dibromide  (ISO)
methamphetamine  (EXP,ISO)
methapyrilene  (ISO)
methidathion  (EXP)
methoxyacetic acid  (ISO)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
ML-7  (EXP,ISO)
mono(2-ethylhexyl) phthalate  (EXP)
mosapride citrate dihydrate  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
nickel atom  (EXP,ISO)
Nor-9-carboxy-delta9-THC  (ISO)
ouabain  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
pioglitazone  (EXP)
pirinixic acid  (EXP)
progesterone  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
silicon dioxide  (ISO)
sirolimus  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (EXP,ISO)
sodium fluoride  (EXP)
succimer  (EXP)
sulforaphane  (ISO)
telmisartan  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thalidomide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vasopressin  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
prostaglandin I2 signaling pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Variation in the myosin light chain kinase gene is associated with development of acute lung injury after major trauma. Christie JD, etal., Crit Care Med. 2008 Aug 28.
2. Novel polymorphisms in the myosin light chain kinase gene confer risk for acute lung injury. Gao L, etal., Am J Respir Cell Mol Biol. 2006 Apr;34(4):487-95. Epub 2006 Jan 6.
3. Polymorphisms in the myosin light chain kinase gene that confer risk of severe sepsis are associated with a lower risk of asthma. Gao L, etal., J Allergy Clin Immunol. 2007 May;119(5):1111-8.
4. Validation study of genetic associations with coronary artery disease on chromosome 3q13-21 and potential effect modification by smoking. Horne BD, etal., Ann Hum Genet. 2009 Nov;73(Pt 6):551-8. doi: 10.1111/j.1469-1809.2009.00540.x. Epub 2009 Aug 25.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Heart failure switches the RV alpha1-adrenergic inotropic response from negative to positive. Wang GY, etal., Am J Physiol Heart Circ Physiol. 2010 Mar;298(3):H913-20. Epub 2009 Dec 24.
Additional References at PubMed
PMID:7493932   PMID:8742690   PMID:8889548   PMID:9181694   PMID:10349636   PMID:10896677   PMID:10922068   PMID:11029314   PMID:11042159   PMID:11076861   PMID:11121372   PMID:11217851  
PMID:11472067   PMID:11832329   PMID:12360480   PMID:12466851   PMID:12477932   PMID:12480816   PMID:12730364   PMID:14702338   PMID:15102471   PMID:15489334   PMID:16055522   PMID:16110338  
PMID:16141072   PMID:16141073   PMID:16184195   PMID:16260603   PMID:16407417   PMID:16461919   PMID:16602821   PMID:17079332   PMID:17131826   PMID:17255312   PMID:17307813   PMID:17429076  
PMID:17577141   PMID:17579061   PMID:18400030   PMID:18524939   PMID:18544931   PMID:18586037   PMID:18587400   PMID:19027740   PMID:19374788   PMID:19484962   PMID:20018858   PMID:20123786  
PMID:20139351   PMID:20404178   PMID:20622107   PMID:21055718   PMID:21074048   PMID:21267068   PMID:21282332   PMID:21298329   PMID:21556048   PMID:21572007   PMID:21670231   PMID:21677750  
PMID:21873635   PMID:21979435   PMID:22219181   PMID:22228679   PMID:22353598   PMID:22485190   PMID:22544752   PMID:22790598   PMID:22817402   PMID:23292072   PMID:23306855   PMID:23362260  
PMID:23555849   PMID:23619146   PMID:23671695   PMID:23793062   PMID:23946491   PMID:24151072   PMID:24428690   PMID:24478334   PMID:24486510   PMID:24522189   PMID:24714365   PMID:24825879  
PMID:24911373   PMID:24911555   PMID:24952961   PMID:25059827   PMID:25122766   PMID:25761595   PMID:26201020   PMID:26228485   PMID:26258553   PMID:26330558   PMID:26514773   PMID:27133129  
PMID:28049658   PMID:28552735   PMID:29057883   PMID:29077485   PMID:29157665   PMID:29606495   PMID:30228103   PMID:30543452   PMID:30667372   PMID:30936544   PMID:31366218   PMID:31513549  
PMID:31904282   PMID:32142630   PMID:32338642   PMID:32772419   PMID:34000008   PMID:34653670   PMID:35365657   PMID:35537812   PMID:36640152   PMID:37781225   PMID:38056232   PMID:38081409  
PMID:38196046   PMID:38376160  


Genomics

Comparative Map Data
Mylk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391634,565,569 - 34,822,806 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1634,565,580 - 34,822,790 (+)EnsemblGRCm39 Ensembl
GRCm381634,745,199 - 35,002,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1634,745,210 - 35,002,420 (+)EnsemblGRCm38mm10GRCm38
MGSCv371634,785,036 - 35,002,520 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361634,704,668 - 34,920,359 (+)NCBIMGSCv36mm8
Celera1635,252,169 - 35,470,294 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1624.49NCBI
MYLK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383123,610,049 - 123,884,332 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3123,610,049 - 123,884,332 (-)EnsemblGRCh38hg38GRCh38
GRCh373123,328,896 - 123,603,179 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363124,813,833 - 125,085,839 (-)NCBINCBI36Build 36hg18NCBI36
Build 343124,813,834 - 124,822,220NCBI
Celera3121,738,078 - 122,010,598 (-)NCBICelera
Cytogenetic Map3q21.1NCBI
HuRef3120,704,092 - 120,976,941 (-)NCBIHuRef
CHM1_13123,294,136 - 123,566,156 (-)NCBICHM1_1
T2T-CHM13v2.03126,330,173 - 126,610,461 (-)NCBIT2T-CHM13v2.0
Mylk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81179,288,243 - 79,535,450 (-)NCBIGRCr8
mRatBN7.21165,783,008 - 66,030,239 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1165,783,008 - 66,030,261 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1174,604,614 - 74,815,083 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01167,267,069 - 67,477,427 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01166,297,014 - 66,507,509 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01169,013,060 - 69,260,039 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1169,013,050 - 69,223,158 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01172,103,710 - 72,350,517 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41167,602,540 - 67,848,794 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11167,661,997 - 67,920,369 (-)NCBI
Celera1165,239,196 - 65,448,599 (-)NCBICelera
Cytogenetic Map11q22NCBI
Mylk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542722,762,221 - 22,970,508 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542722,760,432 - 23,008,432 (-)NCBIChiLan1.0ChiLan1.0
MYLK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22121,568,257 - 121,839,962 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13121,573,032 - 121,844,737 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03120,711,705 - 120,983,432 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13127,612,369 - 127,831,009 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3127,614,173 - 127,793,261 (-)Ensemblpanpan1.1panPan2
MYLK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13326,663,991 - 26,867,370 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3326,664,800 - 26,843,181 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3326,685,793 - 26,889,011 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03326,897,335 - 27,100,530 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3326,897,335 - 27,166,289 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13326,692,727 - 26,872,402 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03326,737,402 - 26,940,787 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03327,349,403 - 27,553,330 (-)NCBIUU_Cfam_GSD_1.0
Mylk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602127,510,307 - 127,686,249 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367251,424,130 - 1,592,840 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367251,418,930 - 1,594,697 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYLK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13136,509,755 - 136,809,668 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113136,509,878 - 136,809,674 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213146,205,306 - 146,232,539 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MYLK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12257,032,264 - 57,259,253 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2257,065,331 - 57,257,464 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041109,093,851 - 109,369,614 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mylk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249121,953,838 - 2,172,561 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249121,952,053 - 2,213,196 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mylk
7978 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:831
Count of miRNA genes:516
Interacting mature miRNAs:608
Transcripts:ENSMUST00000023538, ENSMUST00000155268
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27095908Scvln7_msacral vertebrae length 2, 5 week (mouse)16331786439820362Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
38501069Tip4_mtuberculosis immunophenotype 4, IFN-g level (mouse)16431786444520363Mouse
1301443Mopkd2_mmodifier of polycystic kidney disease progression 2 (mouse)Not determined16464631438646414Mouse
1300656Bgeq15_mbody growth early QTL 15 (mouse)Not determined16577525239775440Mouse
1301945Skl7_mskeletal size (tail length) 7 (mouse)Not determined16577525239775440Mouse
1300943Skts9_mskin tumor susceptibility 9 (mouse)Not determined16577525239775440Mouse
1300987Skull23_mskull morphology 23 (mouse)Not determined16577525239775440Mouse
4141010Bbq1_mbrain and behavior QTL 1 (mouse)Not determined16647700935021216Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
11251724Ewc6_methanol withdrawal and consumption 6 (mouse)16822605242226052Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
10043978Obq35_mobesity QTL 35 (mouse)Not determined16988163143881631Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
1300534Bmd15_mbone mineral density 15 (mouse)Not determined162193838355938574Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
15092062Egrme4_mearly growth rate, maternal effect 4 (mouse)162521866444220250Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
25671380Hrsq2_mhost response to SARS QTL 2, titer (mouse)163140250136540273Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse

Markers in Region
AW489456  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381635,001,497 - 35,001,609UniSTSGRCm38
MGSCv371635,001,583 - 35,001,695UniSTSGRCm37
Celera1635,469,357 - 35,469,469UniSTS
Cytogenetic Map16B3UniSTS
Whitehead/MRC_RH81148.03UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001408261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001408262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001408263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_139300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_176622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017316849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF314149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF335470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF542075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY237726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY237727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC171954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000023538   ⟹   ENSMUSP00000023538
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,605,291 - 34,822,790 (+)Ensembl
GRCm38.p6 Ensembl1634,784,921 - 35,002,420 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155268
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,565,580 - 34,698,206 (+)Ensembl
GRCm38.p6 Ensembl1634,745,210 - 34,877,836 (+)Ensembl
RefSeq Acc Id: ENSMUST00000231589   ⟹   ENSMUSP00000156149
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,815,177 - 34,821,733 (+)Ensembl
GRCm38.p6 Ensembl1634,994,807 - 35,001,363 (+)Ensembl
RefSeq Acc Id: ENSMUST00000231998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,750,712 - 34,784,216 (+)Ensembl
GRCm38.p6 Ensembl1634,930,342 - 34,963,846 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232066
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,773,428 - 34,784,104 (+)Ensembl
GRCm38.p6 Ensembl1634,953,058 - 34,963,734 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232477
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,814,549 - 34,817,205 (+)Ensembl
GRCm38.p6 Ensembl1634,994,179 - 34,996,835 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232482
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,720,625 - 34,807,211 (+)Ensembl
GRCm38.p6 Ensembl1634,900,255 - 34,986,841 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232541
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1634,725,509 - 34,735,361 (+)Ensembl
GRCm38.p6 Ensembl1634,905,139 - 34,914,991 (+)Ensembl
RefSeq Acc Id: NM_001408261   ⟹   NP_001395190
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,627,611 - 34,822,806 (+)NCBI
RefSeq Acc Id: NM_001408262   ⟹   NP_001395191
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,720,610 - 34,822,806 (+)NCBI
RefSeq Acc Id: NM_001408263   ⟹   NP_001395192
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,720,610 - 34,822,806 (+)NCBI
RefSeq Acc Id: NM_139300   ⟹   NP_647461
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,605,273 - 34,822,806 (+)NCBI
GRCm381634,784,950 - 35,002,434 (+)NCBI
MGSCv371634,785,036 - 35,002,520 (+)RGD
Celera1635,252,169 - 35,470,294 (+)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_176622
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,720,610 - 34,822,806 (+)NCBI
RefSeq Acc Id: XM_006521702   ⟹   XP_006521765
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,565,569 - 34,822,806 (+)NCBI
GRCm381634,745,199 - 35,002,436 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006521705   ⟹   XP_006521768
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,750,700 - 34,822,806 (+)NCBI
GRCm381634,930,330 - 35,002,436 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017316849   ⟹   XP_017172338
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391634,565,569 - 34,822,806 (+)NCBI
GRCm381634,745,199 - 35,002,436 (+)NCBI
Sequence:
RefSeq Acc Id: NP_647461   ⟸   NM_139300
- Peptide Label: isoform 2
- UniProtKB: Q9ERD3 (UniProtKB/Swiss-Prot),   Q924D2 (UniProtKB/Swiss-Prot),   Q8K026 (UniProtKB/Swiss-Prot),   Q80YN8 (UniProtKB/Swiss-Prot),   Q80YN7 (UniProtKB/Swiss-Prot),   Q80UX0 (UniProtKB/Swiss-Prot),   Q6PDN3 (UniProtKB/Swiss-Prot),   Q3TSJ7 (UniProtKB/Swiss-Prot),   B1B1A8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521765   ⟸   XM_006521702
- Peptide Label: isoform X1
- UniProtKB: Q9ERD3 (UniProtKB/Swiss-Prot),   Q924D2 (UniProtKB/Swiss-Prot),   Q8K026 (UniProtKB/Swiss-Prot),   Q80YN8 (UniProtKB/Swiss-Prot),   Q80YN7 (UniProtKB/Swiss-Prot),   Q80UX0 (UniProtKB/Swiss-Prot),   Q6PDN3 (UniProtKB/Swiss-Prot),   Q3TSJ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006521768   ⟸   XM_006521705
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017172338   ⟸   XM_017316849
- Peptide Label: isoform X2
- UniProtKB: Q9ERD3 (UniProtKB/Swiss-Prot),   Q924D2 (UniProtKB/Swiss-Prot),   Q8K026 (UniProtKB/Swiss-Prot),   Q80YN8 (UniProtKB/Swiss-Prot),   Q80YN7 (UniProtKB/Swiss-Prot),   Q80UX0 (UniProtKB/Swiss-Prot),   Q6PDN3 (UniProtKB/Swiss-Prot),   Q3TSJ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000156149   ⟸   ENSMUST00000231589
RefSeq Acc Id: ENSMUSP00000023538   ⟸   ENSMUST00000023538
RefSeq Acc Id: NP_001395190   ⟸   NM_001408261
- Peptide Label: isoform 1
RefSeq Acc Id: NP_001395191   ⟸   NM_001408262
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001395192   ⟸   NM_001408263
- Peptide Label: isoform 4
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6PDN3-F1-model_v2 AlphaFold Q6PDN3 1-1941 view protein structure

Promoters
RGD ID:8686064
Promoter ID:EPDNEW_M21063
Type:multiple initiation site
Name:Mylk_1
Description:Mus musculus myosin, light polypeptide kinase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21064  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381634,745,209 - 34,745,269EPDNEW
RGD ID:6827282
Promoter ID:MM_KWN:20857
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:ENSMUST00000068988,   OTTMUST00000041291
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361634,784,481 - 34,784,981 (+)MPROMDB
RGD ID:6827285
Promoter ID:MM_KWN:20858
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:UC007ZBE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361634,899,471 - 34,900,492 (+)MPROMDB
RGD ID:6847320
Promoter ID:MM_ACW:20445
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:MYLK.ESEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361634,930,226 - 34,930,726 (+)MPROMDB
RGD ID:6827278
Promoter ID:MM_KWN:20861
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:ENSMUST00000114930
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361634,952,544 - 34,953,044 (+)MPROMDB
RGD ID:6827283
Promoter ID:MM_KWN:20863
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung
Transcripts:UC007ZBH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361634,993,961 - 34,995,112 (+)MPROMDB
RGD ID:8686066
Promoter ID:EPDNEW_M21064
Type:initiation region
Name:Mylk_2
Description:Mus musculus myosin, light polypeptide kinase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21063  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381634,994,893 - 34,994,953EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:894806 AgrOrtholog
Ensembl Genes ENSMUSG00000022836 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023538 ENTREZGENE
  ENSMUST00000023538.9 UniProtKB/TrEMBL
  ENSMUST00000231589.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MLCK1_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:894806 ENTREZGENE
NCBI Gene 107589 ENTREZGENE
PANTHER IG-LIKE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  IMMUNOGLOBULIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYOSIN LIGHT CHAIN KINASE, SMOOTH MUSCLE-RELATED UniProtKB/TrEMBL
  STRIATED MUSCLE PREFERENTIALLY EXPRESSED PROTEIN KINASE UniProtKB/Swiss-Prot
Pfam 23ISL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  fn3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB MYLK RGD
PhenoGen Mylk PhenoGen
PROSITE FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49265 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1B1A8 ENTREZGENE, UniProtKB/TrEMBL
  MYLK_MOUSE UniProtKB/Swiss-Prot
  Q3TSJ7 ENTREZGENE
  Q6PDN3 ENTREZGENE
  Q80UX0 ENTREZGENE
  Q80YN7 ENTREZGENE
  Q80YN8 ENTREZGENE
  Q8BJ10_MOUSE UniProtKB/TrEMBL
  Q8K026 ENTREZGENE
  Q924D2 ENTREZGENE
  Q9ERD3 ENTREZGENE
UniProt Secondary Q3TSJ7 UniProtKB/Swiss-Prot
  Q80UX0 UniProtKB/Swiss-Prot
  Q80YN7 UniProtKB/Swiss-Prot
  Q80YN8 UniProtKB/Swiss-Prot
  Q8K026 UniProtKB/Swiss-Prot
  Q924D2 UniProtKB/Swiss-Prot
  Q9ERD3 UniProtKB/Swiss-Prot