Il1rapl1 (interleukin 1 receptor accessory protein-like 1) - Rat Genome Database

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Gene: Il1rapl1 (interleukin 1 receptor accessory protein-like 1) Mus musculus
Analyze
Symbol: Il1rapl1
Name: interleukin 1 receptor accessory protein-like 1
RGD ID: 1614042
MGI Page MGI
Description: Enables signaling receptor binding activity. Involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules; nervous system development; and positive regulation of nervous system development. Located in cell surface and dendrite. Is expressed in central nervous system; dorsal root ganglion; eye; lung; and trigeminal nerve. Human ortholog(s) of this gene implicated in intellectual disability and non-syndromic X-linked intellectual disability 21. Orthologous to human IL1RAPL1 (interleukin 1 receptor accessory protein like 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6330532G10Rik; C030039N24; I; IL; IL-1-RAPL-1; IL-1RAPL-1; IL1R8; IL1RAPL; IL1RAPL-1; interleukin-1 receptor accessory protein-like 1; MRX3; MRX34; OP; OPHN4; RIKEN cDNA 6330532G10 gene; TIGI; TIGIRR-2; X-linked interleukin-1 receptor accessory protein-like 1
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X85,784,543 - 87,159,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX85,784,476 - 87,159,251 (-)EnsemblGRCm39 Ensembl
GRCm38X86,740,937 - 88,115,948 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX86,740,870 - 88,115,645 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X83,992,581 - 85,360,962 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X82,999,961 - 83,673,259 (-)NCBIMGSCv36mm8
CeleraX55,555,320 - 55,782,072 (-)NCBICelera
Cytogenetic MapXC1NCBI
cM MapX39.89NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:18287559   PMID:19811529   PMID:20096586   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:21940441   PMID:23785489   PMID:23966701   PMID:25158900   PMID:25312502   PMID:25864829   PMID:25908590   PMID:28576939   PMID:29072292   PMID:29459677  
PMID:30838762   PMID:30995480   PMID:32347567   PMID:34321999   PMID:36551904   PMID:36604605  


Genomics

Comparative Map Data
Il1rapl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X85,784,543 - 87,159,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX85,784,476 - 87,159,251 (-)EnsemblGRCm39 Ensembl
GRCm38X86,740,937 - 88,115,948 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX86,740,870 - 88,115,645 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X83,992,581 - 85,360,962 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X82,999,961 - 83,673,259 (-)NCBIMGSCv36mm8
CeleraX55,555,320 - 55,782,072 (-)NCBICelera
Cytogenetic MapXC1NCBI
cM MapX39.89NCBI
IL1RAPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X28,587,446 - 29,956,718 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX28,587,446 - 29,956,718 (+)EnsemblGRCh38hg38GRCh38
GRCh37X28,605,563 - 29,974,835 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X28,515,480 - 29,884,761 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X28,365,215 - 29,734,493NCBI
CeleraX32,732,824 - 34,100,946 (+)NCBICelera
Cytogenetic MapXp21.3-p21.2NCBI
HuRefX26,346,333 - 27,710,305 (+)NCBIHuRef
CHM1_1X28,636,125 - 30,004,681 (+)NCBICHM1_1
T2T-CHM13v2.0X28,179,409 - 29,548,899 (+)NCBIT2T-CHM13v2.0
Il1rapl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X55,322,779 - 56,827,486 (-)NCBIGRCr8
mRatBN7.2X51,371,969 - 52,876,726 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX51,378,215 - 52,876,772 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX52,707,855 - 53,966,904 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X56,208,265 - 57,467,346 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X53,839,259 - 55,092,392 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X55,439,388 - 57,004,865 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX55,439,578 - 56,765,893 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X56,557,676 - 57,548,519 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0X55,629,811 - 55,687,317 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X73,692,262 - 74,993,367 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X73,765,553 - 74,546,358 (-)NCBI
CeleraX51,905,428 - 53,154,707 (-)NCBICelera
Cytogenetic MapXq21NCBI
IL1RAPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X30,377,318 - 31,749,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X30,380,692 - 31,756,778 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X21,180,693 - 22,548,122 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X28,743,801 - 30,110,177 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX28,950,521 - 30,109,286 (+)Ensemblpanpan1.1panPan2
IL1RAPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X23,747,689 - 25,105,606 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX23,943,871 - 25,099,377 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX28,716,786 - 30,072,066 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X23,768,977 - 25,120,119 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX23,963,965 - 25,119,603 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X23,811,147 - 25,168,166 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X23,817,557 - 25,165,880 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X23,913,009 - 25,261,426 (+)NCBIUU_Cfam_GSD_1.0
Il1rapl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X16,779,973 - 18,009,042 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365536,055,179 - 6,099,514 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365535,063,042 - 5,824,427 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL1RAPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX24,409,327 - 25,806,680 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X24,408,092 - 25,811,129 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X28,021,764 - 28,070,970 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IL1RAPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X27,014,769 - 28,388,176 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605628,985,163 - 30,376,870 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il1rapl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624787268,829 - 1,291,144 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624787266,027 - 1,489,032 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Il1rapl1
37754 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3120
Count of miRNA genes:905
Interacting mature miRNAs:1286
Transcripts:ENSMUST00000078875, ENSMUST00000113964, ENSMUST00000113966
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse

Markers in Region
RH127051  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381127,805,954 - 127,806,176UniSTSGRCm38
GRCm38X87,129,474 - 87,129,696UniSTSGRCm38
MGSCv37X84,374,813 - 84,375,035UniSTSGRCm37
MGSCv371129,702,531 - 129,702,753UniSTSGRCm37
Celera1130,447,402 - 130,447,624UniSTS
CeleraX78,312,545 - 78,312,767UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic MapXC1UniSTS
DXMit147  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,216,315 - 87,216,531UniSTSGRCm38
MGSCv37X84,461,654 - 84,461,870UniSTSGRCm37
CeleraX78,399,650 - 78,399,866UniSTS
Cytogenetic MapXC1UniSTS
cM MapX33.5UniSTS
Whitehead GeneticX25.1UniSTS
Whitehead/MRC_RHX960.7UniSTS
DXMit93  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,069,402 - 87,069,601UniSTSGRCm38
MGSCv37X84,314,741 - 84,314,940UniSTSGRCm37
CeleraX78,253,288 - 78,253,489UniSTS
Cytogenetic MapXC1UniSTS
cM MapX33.2UniSTS
Whitehead GeneticX25.1UniSTS
Whitehead/MRC_RHX945.62UniSTS
UniSTS:224472  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,384,049 - 87,384,165UniSTSGRCm38
MGSCv37X84,629,388 - 84,629,504UniSTSGRCm37
CeleraX78,566,359 - 78,566,475UniSTS
Cytogenetic MapXC1UniSTS
UniSTS:225016  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,045,286 - 87,045,476UniSTSGRCm38
MGSCv37X84,290,625 - 84,290,815UniSTSGRCm37
CeleraX78,229,106 - 78,229,296UniSTS
Cytogenetic MapXC1UniSTS
px-26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,888,967 - 87,889,182UniSTSGRCm38
MGSCv37X85,134,306 - 85,134,521UniSTSGRCm37
CeleraX55,554,135 - 55,554,350UniSTS
Cytogenetic MapXC1UniSTS
px-31h4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,743,630 - 87,743,762UniSTSGRCm38
MGSCv37X84,988,969 - 84,989,101UniSTSGRCm37
CeleraX55,409,877 - 55,410,009UniSTS
Cytogenetic MapXC1UniSTS
px-38g4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,933,892 - 87,934,011UniSTSGRCm38
MGSCv37X85,179,231 - 85,179,350UniSTSGRCm37
CeleraX55,598,650 - 55,598,769UniSTS
Cytogenetic MapXC1UniSTS
px-43h9  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,671,535 - 87,671,773UniSTSGRCm38
MGSCv37X84,916,874 - 84,917,112UniSTSGRCm37
CeleraX55,338,251 - 55,338,489UniSTS
Cytogenetic MapXC1UniSTS
px-49g1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X86,752,688 - 86,752,818UniSTSGRCm38
MGSCv37X83,998,027 - 83,998,157UniSTSGRCm37
CeleraX77,943,505 - 77,943,635UniSTS
Cytogenetic MapXC1UniSTS
px-50a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,226,890 - 87,227,039UniSTSGRCm38
MGSCv37X84,472,229 - 84,472,378UniSTSGRCm37
CeleraX78,410,259 - 78,410,408UniSTS
Cytogenetic MapXC1UniSTS
px-51a10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,310,189 - 87,310,368UniSTSGRCm38
MGSCv37X84,555,528 - 84,555,707UniSTSGRCm37
CeleraX78,493,173 - 78,493,352UniSTS
Cytogenetic MapXC1UniSTS
px-58e2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,437,358 - 87,437,706UniSTSGRCm38
MGSCv37X84,682,697 - 84,683,045UniSTSGRCm37
CeleraX78,619,879 - 78,620,227UniSTS
Cytogenetic MapXC1UniSTS
px-6d7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,984,517 - 87,984,824UniSTSGRCm38
MGSCv37X85,229,856 - 85,230,163UniSTSGRCm37
CeleraX55,649,506 - 55,649,813UniSTS
Cytogenetic MapXC1UniSTS
px-8c8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381673,372,237 - 73,372,338UniSTSGRCm38
GRCm38X87,812,317 - 87,812,419UniSTSGRCm38
MGSCv37X85,057,656 - 85,057,758UniSTSGRCm37
MGSCv371673,372,482 - 73,372,583UniSTSGRCm37
Celera1673,629,709 - 73,629,810UniSTS
CeleraX55,478,045 - 55,478,147UniSTS
Cytogenetic MapXC1UniSTS
px-3a3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,590,706 - 87,590,808UniSTSGRCm38
MGSCv37X84,836,045 - 84,836,147UniSTSGRCm37
CeleraX55,257,762 - 55,257,864UniSTS
Cytogenetic MapXC1UniSTS
IL1RAPL1_153  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X86,747,110 - 86,747,880UniSTSGRCm38
MGSCv37X83,992,449 - 83,993,219UniSTSGRCm37
CeleraX77,937,936 - 77,938,706UniSTS
Cytogenetic MapXC1UniSTS
RH143116  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X87,938,008 - 87,938,716UniSTSGRCm38
GRCm381846,953,171 - 46,953,833UniSTSGRCm38
MGSCv371847,112,825 - 47,113,487UniSTSGRCm37
MGSCv37X85,183,347 - 85,184,055UniSTSGRCm37
Celera1848,314,866 - 48,315,528UniSTS
CeleraX55,602,766 - 55,603,467UniSTS
Cytogenetic MapXC1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001160403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK018225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL627409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL731705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC119580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX005231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX088567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX649618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX890584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR538724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000078875   ⟹   ENSMUSP00000077915
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX85,790,848 - 86,933,841 (-)Ensembl
GRCm38.p6 EnsemblX86,747,242 - 87,890,235 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113964   ⟹   ENSMUSP00000109597
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX85,812,724 - 87,159,251 (-)Ensembl
GRCm38.p6 EnsemblX86,769,118 - 88,115,645 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113966   ⟹   ENSMUSP00000109599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX85,784,476 - 87,159,251 (-)Ensembl
GRCm38.p6 EnsemblX86,740,870 - 88,115,645 (-)Ensembl
RefSeq Acc Id: NM_001160403   ⟹   NP_001153875
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X85,784,543 - 87,159,554 (-)NCBI
GRCm38X86,740,937 - 88,115,948 (-)NCBI
MGSCv37X83,992,581 - 85,360,962 (-)RGD
CeleraX55,555,320 - 55,782,072 (-)NCBI
CeleraX77,938,068 - 78,614,387 (-)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001153875 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI19581 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000077915.2
  ENSMUSP00000109597.2
  ENSMUSP00000109599
  ENSMUSP00000109599.2
GenBank Protein P59823 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001153875   ⟸   NM_001160403
- Peptide Label: precursor
- UniProtKB: P59823 (UniProtKB/Swiss-Prot),   B1ASU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000109597   ⟸   ENSMUST00000113964
RefSeq Acc Id: ENSMUSP00000109599   ⟸   ENSMUST00000113966
RefSeq Acc Id: ENSMUSP00000077915   ⟸   ENSMUST00000078875
Protein Domains
Ig-like   Ig-like C2-type   TIR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P59823-F1-model_v2 AlphaFold P59823 1-695 view protein structure

Promoters
RGD ID:13680908
Promoter ID:EPDNEW_M24603
Type:single initiation site
Name:Il1rapl1_2
Description:Mus musculus interleukin 1 receptor accessory protein-like 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M24604  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X88,055,236 - 88,055,296EPDNEW
RGD ID:13680910
Promoter ID:EPDNEW_M24604
Type:initiation region
Name:Il1rapl1_1
Description:Mus musculus interleukin 1 receptor accessory protein-like 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M24603  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X88,115,613 - 88,115,673EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2687319 AgrOrtholog
Ensembl Genes ENSMUSG00000052372 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000078875.8 UniProtKB/TrEMBL
  ENSMUST00000113964.2 UniProtKB/TrEMBL
  ENSMUST00000113966 ENTREZGENE
  ENSMUST00000113966.8 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.10140 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IL-1_rcpt_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Toll_tir_struct_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:331461 UniProtKB/TrEMBL
MGD MGI:2687319 ENTREZGENE
NCBI Gene 331461 ENTREZGENE
PANTHER INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN-LIKE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11890 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ig_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00047 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Il1rapl1 PhenoGen
PRINTS INTRLKN1R1F UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1ASU0 ENTREZGENE, UniProtKB/TrEMBL
  IRPL1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q0VDP7_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-26 Il1rapl1  interleukin 1 receptor accessory protein-like 1  6330532G10Rik  RIKEN cDNA 6330532G10 gene  Data merged from RGD:1610211 737654 PROVISIONAL