4930511A08Rik (RIKEN cDNA 4930511A08 gene) - Rat Genome Database

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Gene: 4930511A08Rik (RIKEN cDNA 4930511A08 gene) Mus musculus
Analyze
Symbol: 4930511A08Rik (Ensembl: Magi1)
Name: RIKEN cDNA 4930511A08 gene (Ensembl:membrane associated guanylate kinase, WW and PDZ domain containing 1)
RGD ID: 1612977
MGI Page MGI
Description:
Type: ncrna (Ensembl: protein-coding)
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC78178; uncharacterized protein LOC78178
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39694,109,904 - 94,214,423 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl693,652,436 - 94,260,898 (-)EnsemblGRCm39 Ensembl
GRCm38694,132,923 - 94,237,442 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map6D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 4930511A08Rik
3899 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
10412119Stv_mstriatal volumne (mouse)Not determined660026991100026967Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66346172197461888Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666690851100691013Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670402880104403016Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670402880104403016Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671552042105552160Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671958006105958152Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675424566104480516Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67552133994202936Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67552133994202936Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67797698396976961Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681476981102176961Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686783787113521563Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687480321121480516Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined688982366122982564Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690772571124772807Mouse
11532719Sluc45_msusceptibility to lung cancer 45 (mouse)69258428798235894Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92584287111981699Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000055224   ⟹   ENSMUSP00000062085
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,652,436 - 94,260,303 (-)Ensembl
RefSeq Acc Id: ENSMUST00000089317   ⟹   ENSMUSP00000086730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,652,436 - 94,260,303 (-)Ensembl
RefSeq Acc Id: ENSMUST00000093769   ⟹   ENSMUSP00000091283
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,655,017 - 93,890,671 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl694,109,904 - 94,260,006 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203519   ⟹   ENSMUSP00000145244
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,659,992 - 94,260,876 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203688   ⟹   ENSMUSP00000145515
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,658,459 - 93,890,535 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204167   ⟹   ENSMUSP00000145200
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,769,385 - 93,890,237 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204347   ⟹   ENSMUSP00000144881
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,652,436 - 94,260,898 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204532   ⟹   ENSMUSP00000144769
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,659,048 - 93,889,944 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204788   ⟹   ENSMUSP00000145434
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,762,284 - 93,769,520 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205116   ⟹   ENSMUSP00000145251
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl693,750,597 - 93,889,485 (-)Ensembl
RefSeq Acc Id: NR_130996
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39694,109,904 - 94,214,423 (-)NCBI
GRCm38694,132,923 - 94,237,442 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000045095 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000203034 ENTREZGENE
MGD MGI:1925428 ENTREZGENE
NCBI Gene 78178 ENTREZGENE
PhenoGen 4930511A08Rik PhenoGen
RNAcentral URS000081219F RNACentral