HP1BP3 (heterochromatin protein 1 binding protein 3) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: HP1BP3 (heterochromatin protein 1 binding protein 3) Homo sapiens
Analyze
Symbol: HP1BP3
Name: heterochromatin protein 1 binding protein 3
RGD ID: 1606796
HGNC Page HGNC:24973
Description: Enables DNA binding activity and nucleosome binding activity. Involved in several processes, including cellular response to hypoxia; heterochromatin organization; and regulation of nucleus size. Located in chromosome and nuclear speck.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: heterochromatin protein 1, binding protein 3; heterochromatin protein 1-binding protein 3; HP1-BP74; HP1BP74; MGC43701; RP5-930J4.3
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38120,740,266 - 20,787,307 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl120,740,266 - 20,787,323 (-)EnsemblGRCh38hg38GRCh38
GRCh37121,066,759 - 21,113,800 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36120,941,758 - 20,985,768 (-)NCBINCBI36Build 36hg18NCBI36
Celera119,394,945 - 19,438,922 (-)NCBICelera
Cytogenetic Map1p36.12NCBI
HuRef119,314,898 - 19,359,180 (-)NCBIHuRef
CHM1_1121,179,997 - 21,223,982 (-)NCBICHM1_1
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IBA,IDA,IEA)
nuclear speck  (IDA)
nucleosome  (IEA)
nucleus  (IBA,IDA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:14702039   PMID:19165527   PMID:19394292   PMID:19454010   PMID:20042602   PMID:20379614   PMID:20800603   PMID:21145461   PMID:21244100   PMID:21832049   PMID:21873635  
PMID:21907836   PMID:22199357   PMID:22412018   PMID:22586326   PMID:22623428   PMID:22658674   PMID:22751105   PMID:22939624   PMID:22939629   PMID:22990118   PMID:23443559   PMID:23455922  
PMID:23940030   PMID:24317310   PMID:24457600   PMID:24711643   PMID:24778252   PMID:24830416   PMID:25100860   PMID:25416956   PMID:25662603   PMID:25665578   PMID:25693804   PMID:25798074  
PMID:25921289   PMID:26186194   PMID:26209609   PMID:26402843   PMID:26496610   PMID:26503311   PMID:26673895   PMID:26725010   PMID:26831064   PMID:26912792   PMID:27025967   PMID:27425409  
PMID:28077445   PMID:28225217   PMID:28302793   PMID:28514442   PMID:28515276   PMID:28611215   PMID:28712289   PMID:28977666   PMID:29117863   PMID:29128334   PMID:29180619   PMID:29229926  
PMID:29298432   PMID:29478914   PMID:29568061   PMID:29721183   PMID:29802200   PMID:29845934   PMID:29884807   PMID:29911972   PMID:29991511   PMID:30021884   PMID:30344098   PMID:30349055  
PMID:30425250   PMID:30462309   PMID:30463901   PMID:30554943   PMID:30572598   PMID:30575818   PMID:30779731   PMID:30804502   PMID:31048545   PMID:31067453   PMID:31076518   PMID:31091453  
PMID:31180492   PMID:31239290   PMID:31248990   PMID:31586073   PMID:31819167   PMID:31822558   PMID:32129710   PMID:32203420   PMID:32416067   PMID:32687490   PMID:32707033   PMID:32780723  
PMID:32807901   PMID:32939012   PMID:32994395   PMID:33024031   PMID:33596420   PMID:33658012   PMID:33729478   PMID:33731348   PMID:33916271   PMID:33957083   PMID:33961781   PMID:34079125  
PMID:34537242   PMID:34591612   PMID:34662580   PMID:34718347   PMID:34767673   PMID:35013218   PMID:35140242   PMID:35253629   PMID:35256949   PMID:35271311   PMID:35384245   PMID:35439318  
PMID:35509820   PMID:35652658   PMID:35654790   PMID:35819319   PMID:35831314   PMID:35833506   PMID:35844135   PMID:35850772   PMID:35944360   PMID:36089195   PMID:36114006   PMID:36168627  
PMID:36180891   PMID:36215168   PMID:36217030   PMID:36244648   PMID:36373674   PMID:36517590   PMID:36526897   PMID:36537216   PMID:36574265   PMID:36634849   PMID:36774506   PMID:36779763  
PMID:36880596   PMID:36912080   PMID:36964488   PMID:37827155   PMID:38113892  


Genomics

Comparative Map Data
HP1BP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38120,740,266 - 20,787,307 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl120,740,266 - 20,787,323 (-)EnsemblGRCh38hg38GRCh38
GRCh37121,066,759 - 21,113,800 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36120,941,758 - 20,985,768 (-)NCBINCBI36Build 36hg18NCBI36
Celera119,394,945 - 19,438,922 (-)NCBICelera
Cytogenetic Map1p36.12NCBI
HuRef119,314,898 - 19,359,180 (-)NCBIHuRef
CHM1_1121,179,997 - 21,223,982 (-)NCBICHM1_1
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBIT2T-CHM13v2.0
Hp1bp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394137,943,781 - 137,971,994 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4137,943,607 - 137,971,994 (+)EnsemblGRCm39 Ensembl
GRCm384138,216,470 - 138,244,683 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4138,216,296 - 138,244,683 (+)EnsemblGRCm38mm10GRCm38
MGSCv374137,772,542 - 137,799,085 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364137,488,738 - 137,515,236 (+)NCBIMGSCv36mm8
Celera4139,993,842 - 140,021,475 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map470.03NCBI
Hp1bp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85155,719,109 - 155,746,329 (+)NCBIGRCr8
mRatBN7.25150,435,781 - 150,463,004 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5150,433,740 - 150,463,000 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5153,131,550 - 153,158,802 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05154,905,830 - 154,933,084 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05154,887,855 - 154,915,109 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05156,581,732 - 156,609,059 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5156,581,732 - 156,609,059 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05160,331,116 - 160,358,541 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45156,996,670 - 157,024,045 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15157,006,708 - 157,034,082 (+)NCBI
Celera5148,829,677 - 148,857,023 (+)NCBICelera
Cytogenetic Map5q36NCBI
Hp1bp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554521,270,658 - 1,308,167 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554521,271,133 - 1,308,167 (-)NCBIChiLan1.0ChiLan1.0
HP1BP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21206,337,978 - 206,382,863 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11205,449,905 - 205,494,800 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0119,691,173 - 19,736,062 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1120,736,259 - 20,780,690 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl120,736,259 - 20,780,690 (-)Ensemblpanpan1.1panPan2
HP1BP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1278,164,239 - 78,203,032 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl278,164,173 - 78,201,555 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha274,678,071 - 74,717,452 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0278,732,908 - 78,772,521 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl278,732,911 - 78,774,761 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1275,549,549 - 75,588,868 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0276,562,054 - 76,601,598 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,564,689 - 77,604,115 (+)NCBIUU_Cfam_GSD_1.0
Hp1bp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505840,841,180 - 40,874,916 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364746,665,507 - 6,700,152 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364746,665,989 - 6,699,722 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HP1BP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl678,975,555 - 79,007,889 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1678,975,551 - 79,007,921 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2673,219,226 - 73,249,015 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HP1BP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120111,766,259 - 111,815,233 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20111,772,973 - 111,818,038 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660334,419,797 - 4,466,087 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hp1bp3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247645,760,002 - 5,794,705 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HP1BP3
19 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1p36.21-36.12(chr1:15385267-20980349)x1 copy number loss See cases [RCV000051146] Chr1:15385267..20980349 [GRCh38]
Chr1:15711763..21306842 [GRCh37]
Chr1:15584350..21179429 [NCBI36]
Chr1:1p36.21-36.12		 pathogenic
GRCh38/hg38 1p36.13-36.12(chr1:18347821-22512894)x1 copy number loss See cases [RCV000053789] Chr1:18347821..22512894 [GRCh38]
Chr1:18674315..22839387 [GRCh37]
Chr1:18546902..22711974 [NCBI36]
Chr1:1p36.13-36.12		 pathogenic
GRCh38/hg38 1p36.22-36.12(chr1:10556797-22557907)x1 copy number loss See cases [RCV000053760] Chr1:10556797..22557907 [GRCh38]
Chr1:10616854..22884400 [GRCh37]
Chr1:10539441..22756987 [NCBI36]
Chr1:1p36.22-36.12		 pathogenic
GRCh38/hg38 1p36.12(chr1:20482657-21271999)x1 copy number loss See cases [RCV000053796] Chr1:20482657..21271999 [GRCh38]
Chr1:20809150..21598492 [GRCh37]
Chr1:20681737..21471079 [NCBI36]
Chr1:1p36.12		 pathogenic
NM_016287.3(HP1BP3):c.564C>T (p.Ile188=) single nucleotide variant Malignant melanoma [RCV000064514] Chr1:20771020 [GRCh38]
Chr1:21097513 [GRCh37]
Chr1:20970100 [NCBI36]
Chr1:1p36.12		 not provided
NM_016287.3(HP1BP3):c.351-615A>T single nucleotide variant Lung cancer [RCV000090413] Chr1:20774225 [GRCh38]
Chr1:21100718 [GRCh37]
Chr1:1p36.12		 uncertain significance
GRCh38/hg38 1p36.13-36.12(chr1:19548795-20935131)x1 copy number loss See cases [RCV000138079] Chr1:19548795..20935131 [GRCh38]
Chr1:19875289..21261624 [GRCh37]
Chr1:19747876..21134211 [NCBI36]
Chr1:1p36.13-36.12		 likely pathogenic|uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207058] Chr1:909238..24706269 [GRCh37]
Chr1:1p36.33-36.11		 uncertain significance
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3 copy number loss not provided [RCV000762767] Chr1:20608823..120546301 [GRCh37]
Chr1:1p36.12-12		 likely benign
chr1:17555508-24706269 complex variant complex Breast ductal adenocarcinoma [RCV000207266] Chr1:17555508..24706269 [GRCh37]
Chr1:1p36.13-36.11		 uncertain significance
GRCh37/hg19 1p36.13-36.12(chr1:20067124-22537862)x1 copy number loss See cases [RCV000447314] Chr1:20067124..22537862 [GRCh37]
Chr1:1p36.13-36.12		 pathogenic
GRCh37/hg19 1p36.32-36.12(chr1:2749920-22564787)x1 copy number loss See cases [RCV000446470] Chr1:2749920..22564787 [GRCh37]
Chr1:1p36.32-36.12		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_001372052.1(HP1BP3):c.1593A>G (p.Ala531=) single nucleotide variant not provided [RCV000883562] Chr1:20744866 [GRCh38]
Chr1:21071359 [GRCh37]
Chr1:1p36.12		 benign
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3 copy number gain Global developmental delay [RCV000787285] Chr1:103343285..103455144 [GRCh37]
Chr1:1p36.22-21.1		 uncertain significance
NC_000001.10:g.(?_19199339)_(22987879_?)dup duplication Autosomal recessive early-onset Parkinson disease 6 [RCV003113320]|Congenital disorder of glycosylation type Ir [RCV003113321]|Hyperprolinemia type 2 [RCV003107740] Chr1:19199339..22987879 [GRCh37]
Chr1:1p36.13-36.12		 uncertain significance
GRCh37/hg19 1p36.13-36.12(chr1:16785250-23491592)x1 copy number loss 1p36.1 deletion syndrome [RCV001614471] Chr1:16785250..23491592 [GRCh37]
Chr1:1p36.13-36.12		 pathogenic
GRCh37/hg19 1p36.13-36.12(chr1:17284906-21778495)x1 copy number loss not provided [RCV001259567] Chr1:17284906..21778495 [GRCh37]
Chr1:1p36.13-36.12		 pathogenic
GRCh37/hg19 1p36.21-36.12(chr1:16041431-21295864)x1 copy number loss not provided [RCV001259568] Chr1:16041431..21295864 [GRCh37]
Chr1:1p36.21-36.12		 pathogenic
NC_000001.10:g.(?_19199339)_(24690861_?)dup duplication Deficiency of hydroxymethylglutaryl-CoA lyase [RCV003122155] Chr1:19199339..24690861 [GRCh37]
Chr1:1p36.13-36.11		 uncertain significance
NM_001372052.1(HP1BP3):c.79G>A (p.Ala27Thr) single nucleotide variant Inborn genetic diseases [RCV003196967] Chr1:20780362 [GRCh38]
Chr1:21106855 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.1403A>G (p.Lys468Arg) single nucleotide variant Inborn genetic diseases [RCV002817631] Chr1:20745056 [GRCh38]
Chr1:21071549 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.1397C>T (p.Pro466Leu) single nucleotide variant Inborn genetic diseases [RCV002772495] Chr1:20745062 [GRCh38]
Chr1:21071555 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.937C>G (p.Gln313Glu) single nucleotide variant Inborn genetic diseases [RCV002737264] Chr1:20757210 [GRCh38]
Chr1:21083703 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.265A>G (p.Thr89Ala) single nucleotide variant Inborn genetic diseases [RCV002853803] Chr1:20776682 [GRCh38]
Chr1:21103175 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.1004C>T (p.Pro335Leu) single nucleotide variant Inborn genetic diseases [RCV002955345] Chr1:20749860 [GRCh38]
Chr1:21076353 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.910G>A (p.Ala304Thr) single nucleotide variant Inborn genetic diseases [RCV002873841] Chr1:20757237 [GRCh38]
Chr1:21083730 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.262G>C (p.Ala88Pro) single nucleotide variant Inborn genetic diseases [RCV002698814] Chr1:20776685 [GRCh38]
Chr1:21103178 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.1408G>A (p.Ala470Thr) single nucleotide variant Inborn genetic diseases [RCV002665960] Chr1:20745051 [GRCh38]
Chr1:21071544 [GRCh37]
Chr1:1p36.12		 likely benign
NM_001372052.1(HP1BP3):c.1024A>C (p.Met342Leu) single nucleotide variant Inborn genetic diseases [RCV002940052] Chr1:20749840 [GRCh38]
Chr1:21076333 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.56T>C (p.Ile19Thr) single nucleotide variant Inborn genetic diseases [RCV003204358] Chr1:20780385 [GRCh38]
Chr1:21106878 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.1624A>C (p.Lys542Gln) single nucleotide variant Inborn genetic diseases [RCV003213041] Chr1:20744835 [GRCh38]
Chr1:21071328 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.113C>T (p.Thr38Ile) single nucleotide variant Inborn genetic diseases [RCV003265540] Chr1:20779895 [GRCh38]
Chr1:21106388 [GRCh37]
Chr1:1p36.12		 uncertain significance
NM_001372052.1(HP1BP3):c.1331A>G (p.Glu444Gly) single nucleotide variant Inborn genetic diseases [RCV003373514] Chr1:20745579 [GRCh38]
Chr1:21072072 [GRCh37]
Chr1:1p36.12		 uncertain significance
GRCh38/hg38 1p36.33-35.1(chr1:99125-34026935)x3 copy number gain Trisomy 12p [RCV003447845] Chr1:99125..34026935 [GRCh38]
Chr1:1p36.33-35.1		 pathogenic
GRCh37/hg19 1p36.13-36.12(chr1:17291707-23016395)x4 copy number gain not provided [RCV003485339] Chr1:17291707..23016395 [GRCh37]
Chr1:1p36.13-36.12		 likely pathogenic
GRCh37/hg19 1p36.12(chr1:21019147-21114016)x1 copy number loss not provided [RCV003483083] Chr1:21019147..21114016 [GRCh37]
Chr1:1p36.12		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3648
Count of miRNA genes:1051
Interacting mature miRNAs:1293
Transcripts:ENST00000312239, ENST00000375000, ENST00000375003, ENST00000414993, ENST00000417710, ENST00000419490, ENST00000419948, ENST00000424732, ENST00000437575, ENST00000438032, ENST00000443615, ENST00000487117, ENST00000488722, ENST00000491748
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-74324  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37121,069,637 - 21,069,824UniSTSGRCh37
Build 36120,942,224 - 20,942,411RGDNCBI36
Celera119,395,411 - 19,395,598RGD
Cytogenetic Map1p36.12UniSTS
HuRef119,315,365 - 19,315,552UniSTS
TNG Radiation Hybrid Map18188.0UniSTS
GeneMap99-GB4 RH Map175.38UniSTS
NCBI RH Map1110.0UniSTS
RH123425  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37121,114,321 - 21,114,606UniSTSGRCh37
Build 36120,986,908 - 20,987,193RGDNCBI36
Celera119,440,061 - 19,440,346RGD
Cytogenetic Map1p36.12UniSTS
HuRef119,360,253 - 19,360,538UniSTS
TNG Radiation Hybrid Map18193.0UniSTS
SHGC-33541  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37121,102,395 - 21,102,496UniSTSGRCh37
Build 36120,974,982 - 20,975,083RGDNCBI36
Celera119,428,130 - 19,428,231RGD
Cytogenetic Map1p36.12UniSTS
HuRef119,348,391 - 19,348,492UniSTS
Stanford-G3 RH Map1974.0UniSTS
GeneMap99-GB4 RH Map175.38UniSTS
GeneMap99-GB4 RH Map177.77UniSTS
Whitehead-RH Map168.2UniSTS
NCBI RH Map1104.1UniSTS
GeneMap99-G3 RH Map11244.0UniSTS
RH16441  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37121,069,327 - 21,069,450UniSTSGRCh37
Build 36120,941,914 - 20,942,037RGDNCBI36
Celera119,395,101 - 19,395,224RGD
Cytogenetic Map1p36.12UniSTS
HuRef119,315,054 - 19,315,177UniSTS
GeneMap99-GB4 RH Map175.38UniSTS
L17709  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map3q27UniSTS
L17796  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map1q24UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map20p11.23-p11.21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p25.1-p23UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic MapXp21.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map12p13-p12UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q22UniSTS
Cytogenetic Map4p15.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p16.3UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map6q22.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map3p21-p12UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p22-p21.33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map2q31.3UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q32-q33UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map14q23-q24.2UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map2p24-p21UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map12p11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic MapXq25-q26UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map15q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map1q25.1-q25.2UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map4q32-q34UniSTS
Cytogenetic MapXq25-q26.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map20q11.22-q12UniSTS
Cytogenetic Map4q34.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map12q13-q14UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q31.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map21q21.2UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map8q21.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map2q36.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map20p12UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map22q13.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map11p14UniSTS
Cytogenetic Map1p32.1UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3p13UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map8q23UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map4q31.3UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic MapXq13UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map16q12-q13UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q13.1UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map22qUniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic MapXp22.12-p22.11UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map8p22-p21.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map7q22-qterUniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map5p15.1-p14.3UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic MapXq22.2UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS
G34827  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.12UniSTS
HP1BP3  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37121,071,495 - 21,072,133UniSTSGRCh37
Celera119,397,269 - 19,397,907UniSTS
HuRef119,317,223 - 19,317,861UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2437 2685 1704 604 1722 445 4356 2122 3679 413 1458 1611 174 1204 2788 4 2
Low 2 306 22 20 229 20 1 75 55 6 2 2 1 1 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001372052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011541532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011541533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF113534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL663074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX882595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE247224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM312215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK000759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF584039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000312239   ⟹   ENSP00000312625
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,742,679 - 20,786,652 (-)Ensembl
RefSeq Acc Id: ENST00000375000   ⟹   ENSP00000364139
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,775,655 - 20,786,640 (-)Ensembl
RefSeq Acc Id: ENST00000375003   ⟹   ENSP00000364142
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,742,682 - 20,775,005 (-)Ensembl
RefSeq Acc Id: ENST00000414993   ⟹   ENSP00000405362
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,776,720 - 20,786,652 (-)Ensembl
RefSeq Acc Id: ENST00000417710   ⟹   ENSP00000391281
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,773,587 - 20,786,283 (-)Ensembl
RefSeq Acc Id: ENST00000419490   ⟹   ENSP00000397656
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,776,713 - 20,786,652 (-)Ensembl
RefSeq Acc Id: ENST00000419948   ⟹   ENSP00000391721
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,747,615 - 20,776,604 (-)Ensembl
RefSeq Acc Id: ENST00000424732   ⟹   ENSP00000402754
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,757,199 - 20,787,312 (-)Ensembl
RefSeq Acc Id: ENST00000437575   ⟹   ENSP00000402096
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,776,698 - 20,787,323 (-)Ensembl
RefSeq Acc Id: ENST00000438032   ⟹   ENSP00000403039
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,740,266 - 20,787,307 (-)Ensembl
RefSeq Acc Id: ENST00000443615   ⟹   ENSP00000401874
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,779,836 - 20,786,666 (-)Ensembl
RefSeq Acc Id: ENST00000487117
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,775,450 - 20,780,541 (-)Ensembl
RefSeq Acc Id: ENST00000488722
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,743,135 - 20,749,747 (-)Ensembl
RefSeq Acc Id: ENST00000491748
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl120,745,592 - 20,750,251 (-)Ensembl
RefSeq Acc Id: NM_001372052   ⟹   NP_001358981
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376787   ⟹   NP_001363716
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376788   ⟹   NP_001363717
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376789   ⟹   NP_001363718
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376790   ⟹   NP_001363719
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376791   ⟹   NP_001363720
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376792   ⟹   NP_001363721
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376793   ⟹   NP_001363722
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376794   ⟹   NP_001363723
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,666 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,224 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376795   ⟹   NP_001363724
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,754,056 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,580,603 - 20,613,865 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376796   ⟹   NP_001363725
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,754,056 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,580,603 - 20,613,210 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001376797   ⟹   NP_001363726
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,754,056 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,580,603 - 20,613,865 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001399820   ⟹   NP_001386749
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBI
RefSeq Acc Id: NM_001399821   ⟹   NP_001386750
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,672 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,230 (-)NCBI
RefSeq Acc Id: NM_001399823   ⟹   NP_001386752
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,786,652 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,210 (-)NCBI
RefSeq Acc Id: NM_016287   ⟹   NP_057371
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,742,679 - 20,786,672 (-)NCBI
GRCh37121,069,170 - 21,113,808 (-)NCBI
Build 36120,941,758 - 20,985,768 (-)NCBI Archive
Celera119,394,945 - 19,438,922 (-)RGD
HuRef119,314,898 - 19,359,180 (-)RGD
CHM1_1121,179,997 - 21,223,982 (-)NCBI
T2T-CHM13v2.0120,569,242 - 20,613,230 (-)NCBI
Sequence:
RefSeq Acc Id: NR_164850
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBI
Sequence:
RefSeq Acc Id: NR_164851
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,740,266 - 20,787,307 (-)NCBI
T2T-CHM13v2.0120,566,829 - 20,613,865 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001358981 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363716 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363717 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363718 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363719 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363720 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363721 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363722 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363723 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363724 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363725 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363726 (Get FASTA)   NCBI Sequence Viewer  
  NP_001386749 (Get FASTA)   NCBI Sequence Viewer  
  NP_001386750 (Get FASTA)   NCBI Sequence Viewer  
  NP_001386752 (Get FASTA)   NCBI Sequence Viewer  
  NP_057371 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF14871 (Get FASTA)   NCBI Sequence Viewer  
  AAH32139 (Get FASTA)   NCBI Sequence Viewer  
  AAH45660 (Get FASTA)   NCBI Sequence Viewer  
  BAF83941 (Get FASTA)   NCBI Sequence Viewer  
  BAG51160 (Get FASTA)   NCBI Sequence Viewer  
  BAG64500 (Get FASTA)   NCBI Sequence Viewer  
  BAG64972 (Get FASTA)   NCBI Sequence Viewer  
  CAD38822 (Get FASTA)   NCBI Sequence Viewer  
  CAE91644 (Get FASTA)   NCBI Sequence Viewer  
  CCQ43536 (Get FASTA)   NCBI Sequence Viewer  
  EAW94950 (Get FASTA)   NCBI Sequence Viewer  
  EAW94951 (Get FASTA)   NCBI Sequence Viewer  
  EAW94952 (Get FASTA)   NCBI Sequence Viewer  
  EAW94953 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000312625
  ENSP00000312625.5
  ENSP00000364139.1
  ENSP00000364142.2
  ENSP00000391281.1
  ENSP00000391721.1
  ENSP00000397656.1
  ENSP00000401874.1
  ENSP00000402096.1
  ENSP00000402754
  ENSP00000402754.1
  ENSP00000403039
  ENSP00000403039.2
  ENSP00000405362.1
GenBank Protein Q5SSJ5 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_057371   ⟸   NM_016287
- Peptide Label: isoform 1
- UniProtKB: Q8NDF0 (UniProtKB/Swiss-Prot),   Q6PIM9 (UniProtKB/Swiss-Prot),   Q5SWC6 (UniProtKB/Swiss-Prot),   Q5SSJ6 (UniProtKB/Swiss-Prot),   Q05BI0 (UniProtKB/Swiss-Prot),   B4E210 (UniProtKB/Swiss-Prot),   B3KMZ8 (UniProtKB/Swiss-Prot),   A8K5D7 (UniProtKB/Swiss-Prot),   A6NI71 (UniProtKB/Swiss-Prot),   Q9UHY0 (UniProtKB/Swiss-Prot),   Q5SSJ5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001358981   ⟸   NM_001372052
- Peptide Label: isoform 1
- UniProtKB: Q8NDF0 (UniProtKB/Swiss-Prot),   Q6PIM9 (UniProtKB/Swiss-Prot),   Q5SWC6 (UniProtKB/Swiss-Prot),   Q5SSJ6 (UniProtKB/Swiss-Prot),   Q5SSJ5 (UniProtKB/Swiss-Prot),   Q05BI0 (UniProtKB/Swiss-Prot),   B4E210 (UniProtKB/Swiss-Prot),   B3KMZ8 (UniProtKB/Swiss-Prot),   A8K5D7 (UniProtKB/Swiss-Prot),   A6NI71 (UniProtKB/Swiss-Prot),   Q9UHY0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001363722   ⟸   NM_001376793
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001363723   ⟸   NM_001376794
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001363719   ⟸   NM_001376790
- Peptide Label: isoform 1
- UniProtKB: Q8NDF0 (UniProtKB/Swiss-Prot),   Q6PIM9 (UniProtKB/Swiss-Prot),   Q5SWC6 (UniProtKB/Swiss-Prot),   Q5SSJ6 (UniProtKB/Swiss-Prot),   Q5SSJ5 (UniProtKB/Swiss-Prot),   Q05BI0 (UniProtKB/Swiss-Prot),   B4E210 (UniProtKB/Swiss-Prot),   B3KMZ8 (UniProtKB/Swiss-Prot),   A8K5D7 (UniProtKB/Swiss-Prot),   A6NI71 (UniProtKB/Swiss-Prot),   Q9UHY0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001363716   ⟸   NM_001376787
- Peptide Label: isoform 1
- UniProtKB: Q8NDF0 (UniProtKB/Swiss-Prot),   Q6PIM9 (UniProtKB/Swiss-Prot),   Q5SWC6 (UniProtKB/Swiss-Prot),   Q5SSJ6 (UniProtKB/Swiss-Prot),   Q5SSJ5 (UniProtKB/Swiss-Prot),   Q05BI0 (UniProtKB/Swiss-Prot),   B4E210 (UniProtKB/Swiss-Prot),   B3KMZ8 (UniProtKB/Swiss-Prot),   A8K5D7 (UniProtKB/Swiss-Prot),   A6NI71 (UniProtKB/Swiss-Prot),   Q9UHY0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001363721   ⟸   NM_001376792
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001363718   ⟸   NM_001376789
- Peptide Label: isoform 1
- UniProtKB: Q8NDF0 (UniProtKB/Swiss-Prot),   Q6PIM9 (UniProtKB/Swiss-Prot),   Q5SWC6 (UniProtKB/Swiss-Prot),   Q5SSJ6 (UniProtKB/Swiss-Prot),   Q5SSJ5 (UniProtKB/Swiss-Prot),   Q05BI0 (UniProtKB/Swiss-Prot),   B4E210 (UniProtKB/Swiss-Prot),   B3KMZ8 (UniProtKB/Swiss-Prot),   A8K5D7 (UniProtKB/Swiss-Prot),   A6NI71 (UniProtKB/Swiss-Prot),   Q9UHY0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001363720   ⟸   NM_001376791
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001363717   ⟸   NM_001376788
- Peptide Label: isoform 1
- UniProtKB: Q8NDF0 (UniProtKB/Swiss-Prot),   Q6PIM9 (UniProtKB/Swiss-Prot),   Q5SWC6 (UniProtKB/Swiss-Prot),   Q5SSJ6 (UniProtKB/Swiss-Prot),   Q5SSJ5 (UniProtKB/Swiss-Prot),   Q05BI0 (UniProtKB/Swiss-Prot),   B4E210 (UniProtKB/Swiss-Prot),   B3KMZ8 (UniProtKB/Swiss-Prot),   A8K5D7 (UniProtKB/Swiss-Prot),   A6NI71 (UniProtKB/Swiss-Prot),   Q9UHY0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001363726   ⟸   NM_001376797
- Peptide Label: isoform 4
- UniProtKB: Q5SWC8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001363724   ⟸   NM_001376795
- Peptide Label: isoform 3
- UniProtKB: Q5SWC8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001363725   ⟸   NM_001376796
- Peptide Label: isoform 3
- UniProtKB: Q5SWC8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000403039   ⟸   ENST00000438032
RefSeq Acc Id: ENSP00000402754   ⟸   ENST00000424732
RefSeq Acc Id: ENSP00000405362   ⟸   ENST00000414993
RefSeq Acc Id: ENSP00000364139   ⟸   ENST00000375000
RefSeq Acc Id: ENSP00000364142   ⟸   ENST00000375003
RefSeq Acc Id: ENSP00000391281   ⟸   ENST00000417710
RefSeq Acc Id: ENSP00000401874   ⟸   ENST00000443615
RefSeq Acc Id: ENSP00000312625   ⟸   ENST00000312239
RefSeq Acc Id: ENSP00000397656   ⟸   ENST00000419490
RefSeq Acc Id: ENSP00000391721   ⟸   ENST00000419948
RefSeq Acc Id: ENSP00000402096   ⟸   ENST00000437575
RefSeq Acc Id: NP_001386749   ⟸   NM_001399820
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001386750   ⟸   NM_001399821
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001386752   ⟸   NM_001399823
- Peptide Label: isoform 2
Protein Domains
H15

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5SSJ5-F1-model_v2 AlphaFold Q5SSJ5 1-553 view protein structure

Promoters
RGD ID:6854390
Promoter ID:EPDNEW_H360
Type:multiple initiation site
Name:HP1BP3_2
Description:heterochromatin protein 1 binding protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H361  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,780,552 - 20,780,612EPDNEW
RGD ID:6854392
Promoter ID:EPDNEW_H361
Type:initiation region
Name:HP1BP3_1
Description:heterochromatin protein 1 binding protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H360  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38120,786,652 - 20,786,712EPDNEW
RGD ID:6785735
Promoter ID:HG_KWN:1164
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:ENST00000375003
Position:
Human AssemblyChrPosition (strand)Source
Build 36120,973,151 - 20,973,651 (-)MPROMDB
RGD ID:6785218
Promoter ID:HG_KWN:1167
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000360142,   ENST00000375000,   ENST00000400444,   OTTHUMT00000007457,   OTTHUMT00000318666,   OTTHUMT00000318667,   OTTHUMT00000318669,   OTTHUMT00000318670,   UC001BDV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36120,985,441 - 20,986,647 (-)MPROMDB
RGD ID:6785758
Promoter ID:HG_KWN:1168
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562,   Lymphoblastoid
Transcripts:OTTHUMT00000007461,   OTTHUMT00000007462,   OTTHUMT00000318668,   UC001BDZ.1,   UC001BEA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36120,986,879 - 20,987,379 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24973 AgrOrtholog
COSMIC HP1BP3 COSMIC
Ensembl Genes ENSG00000127483 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000312239 ENTREZGENE
  ENST00000312239.10 UniProtKB/Swiss-Prot
  ENST00000375000.5 UniProtKB/Swiss-Prot
  ENST00000375003.6 UniProtKB/Swiss-Prot
  ENST00000414993.1 UniProtKB/TrEMBL
  ENST00000417710.5 UniProtKB/TrEMBL
  ENST00000419490.5 UniProtKB/TrEMBL
  ENST00000419948.5 UniProtKB/TrEMBL
  ENST00000424732 ENTREZGENE
  ENST00000424732.5 UniProtKB/TrEMBL
  ENST00000437575.5 UniProtKB/TrEMBL
  ENST00000438032 ENTREZGENE
  ENST00000438032.6 UniProtKB/Swiss-Prot
  ENST00000443615.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000127483 GTEx
HGNC ID HGNC:24973 ENTREZGENE
Human Proteome Map HP1BP3 Human Proteome Map
InterPro Histone_H1/H5_H15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Histone_H5 UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:50809 UniProtKB/Swiss-Prot
NCBI Gene 50809 ENTREZGENE
OMIM 616072 OMIM
PANTHER PTHR15832:SF1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHC (SRC HOMOLOGY DOMAIN C-TERMINAL) ADAPTOR HOMOLOG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Linker_histone UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142671673 PharmGKB
PRINTS HISTONEH5 UniProtKB/TrEMBL
PROSITE H15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART H15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6NI71 ENTREZGENE
  A8K5D7 ENTREZGENE
  B0QZK4_HUMAN UniProtKB/TrEMBL
  B0QZK5_HUMAN UniProtKB/TrEMBL
  B0QZK6_HUMAN UniProtKB/TrEMBL
  B0QZK7_HUMAN UniProtKB/TrEMBL
  B0QZK8_HUMAN UniProtKB/TrEMBL
  B0QZK9_HUMAN UniProtKB/TrEMBL
  B3KMZ8 ENTREZGENE
  B4E0N8_HUMAN UniProtKB/TrEMBL
  B4E210 ENTREZGENE
  HP1B3_HUMAN UniProtKB/Swiss-Prot
  L8E9W8_HUMAN UniProtKB/TrEMBL
  Q05BI0 ENTREZGENE
  Q5SSJ5 ENTREZGENE
  Q5SSJ6 ENTREZGENE
  Q5SWC6 ENTREZGENE
  Q5SWC8 ENTREZGENE, UniProtKB/TrEMBL
  Q6PIM9 ENTREZGENE
  Q8NDF0 ENTREZGENE
  Q9UHY0 ENTREZGENE
UniProt Secondary A6NI71 UniProtKB/Swiss-Prot
  A8K5D7 UniProtKB/Swiss-Prot
  B3KMZ8 UniProtKB/Swiss-Prot
  B4E210 UniProtKB/Swiss-Prot
  Q05BI0 UniProtKB/Swiss-Prot
  Q5SSJ6 UniProtKB/Swiss-Prot
  Q5SWC6 UniProtKB/Swiss-Prot
  Q6PIM9 UniProtKB/Swiss-Prot
  Q8NDF0 UniProtKB/Swiss-Prot
  Q9UHY0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-29 HP1BP3  heterochromatin protein 1 binding protein 3    heterochromatin protein 1, binding protein 3  Symbol and/or name change 5135510 APPROVED