Gene: PRR16 (proline rich 16)
Homo sapiens |
| Symbol: |
PRR16
|
| Name: |
proline rich 16
|
| Description: |
INTERACTS WITH 17beta-estradiol; 2-methylcholine; all-trans-retinoic acid |
| Type: |
protein-coding
|
| RefSeq Status: |
PROVISIONAL
|
| Also known as: |
DSC54; mesenchymal stem cell protein DSC54; MGC104614; OTTHUMP00000159145; proline-rich protein 16
|
| Orthologs: |
Mus musculus : Prr16
(proline rich 16)
MGI
Rattus norvegicus : Prr16
(proline rich 16)
|
| Latest Assembly: |
Human Genome Assembly GRCh37
|
| Position: |
| Map | Chr | Position | Strand | Source |
|---|
Human Alternate Assembly CHM1_1 | 5 | 120,080,665 - 120,303,636 | + | NCBI | Human Genome Assembly HuRef | 5 | 114,992,462 - 115,215,612 | + | NCBI | Human Genome Assembly GRCh37 | 5 | 119,800,019 - 120,022,965 | + | NCBI | Human Celera Assembly | 5 | 115,751,492 - 115,974,376 | + | NCBI | Human Genome Assembly Build 36 | 5 | 119,827,918 - 120,050,864 | + | NCBI | Human Cytogenetic Map | 5 | q23.1 | | NCBI |
|
| Model |
|
|
 Gene-Chemical Interaction Annotations
References - curated References - uncurated Genomics
Comparative Map Data
| PRR16 (Homo sapiens) |
| Map | Chr | Position | Strand | Source |
|---|
Human Alternate Assembly CHM1_1 | 5 | 120,080,665 - 120,303,636 | + | NCBI | Human Genome Assembly HuRef | 5 | 114,992,462 - 115,215,612 | + | NCBI | Human Genome Assembly GRCh37 | 5 | 119,800,019 - 120,022,965 | + | NCBI | Human Celera Assembly | 5 | 115,751,492 - 115,974,376 | + | NCBI | Human Genome Assembly Build 36 | 5 | 119,827,918 - 120,050,864 | + | NCBI | Human Cytogenetic Map | 5 | q23.1 | | NCBI |
|
| Prr16 (Mus musculus) |
| Map | Chr | Position | Strand | Source |
|---|
Mouse Genome Assembly GRCm38 | 18 | 51,117,898 - 51,304,641 | + | NCBI | Mouse cM Map | 18 | | + | NCBI | Mouse Celera Assembly | 18 | 52,436,212 - 52,622,381 | + | NCBI | Mouse Genome Assembly Build 37 | 18 | 51,277,552 - 51,464,295 | + | NCBI | Mouse Genome Assembly Build 36.1 | 18 | 51,277,387 - 51,464,844 | + | NCBI | Mouse Cytogenetic Map | 18 | D1 | | NCBI |
|
| Prr16 (Rattus norvegicus) |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 18 | q11 | | NCBI | RGSC Genome Assembly v5.0 | 18 | 45,166,501 - 45,372,242 | + | NCBI | RGSC Genome Assembly v3.4 | 18 | 46,322,191 - 46,534,140 | + | NCBI | Rat Celera Assembly | 18 | 42,638,133 - 42,843,435 | + | NCBI |
|
Position Markers
| RH120033 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 55093.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 114,999,169 - 114,999,479 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,806,726 - 119,807,036 | | UniSTS | Human Celera Assembly | 5 | 115,758,199 - 115,758,509 | | RGD | Human Genome Assembly Build 36 | 5 | 119,834,625 - 119,834,935 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| RH122868 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 55128.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 115,081,694 - 115,081,988 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,889,008 - 119,889,302 | | UniSTS | Human Celera Assembly | 5 | 115,840,475 - 115,840,769 | | RGD | Human Genome Assembly Build 36 | 5 | 119,916,907 - 119,917,201 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| G59165 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 55080.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 114,999,744 - 115,000,046 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,807,301 - 119,807,603 | | UniSTS | Human Celera Assembly | 5 | 115,758,774 - 115,759,076 | | RGD | Human Genome Assembly Build 36 | 5 | 119,835,200 - 119,835,502 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| G59612 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 55106.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 115,038,902 - 115,039,024 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,846,218 - 119,846,340 | | UniSTS | Human Celera Assembly | 5 | 115,797,683 - 115,797,805 | | RGD | Human Genome Assembly Build 36 | 5 | 119,874,117 - 119,874,239 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| SHGC-110858 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 55137.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 115,104,272 - 115,104,376 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,911,584 - 119,911,688 | | UniSTS | Human Celera Assembly | 5 | 115,863,051 - 115,863,155 | | RGD | Human Genome Assembly Build 36 | 5 | 119,939,483 - 119,939,587 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| SHGC-111182 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 55074.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 115,010,829 - 115,011,109 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,818,387 - 119,818,667 | | UniSTS | Human Celera Assembly | 5 | 115,769,859 - 115,770,139 | | RGD | Human Genome Assembly Build 36 | 5 | 119,846,286 - 119,846,566 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| SHGC-111918 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 76859.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 115,148,843 - 115,149,125 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,956,151 - 119,956,433 | | UniSTS | Human Celera Assembly | 5 | 115,907,621 - 115,907,903 | | RGD | Human Genome Assembly Build 36 | 5 | 119,984,050 - 119,984,332 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| SHGC-142656 |
| Map | Chr | Position | Strand | Source |
|---|
Human TNG Radiation Hybrid Map | 5 | 76891.0 | | UniSTS | Human Genome Assembly HuRef | 5 | 115,190,098 - 115,190,444 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,997,462 - 119,997,808 | | UniSTS | Human Celera Assembly | 5 | 115,948,875 - 115,949,221 | | RGD | Human Genome Assembly Build 36 | 5 | 120,025,361 - 120,025,707 | | RGD | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
| G54587 |
| Map | Chr | Position | Strand | Source |
|---|
Human Genome Assembly HuRef | 5 | 115,038,895 - 115,039,044 | | UniSTS | Human Genome Assembly GRCh37 | 5 | 119,846,211 - 119,846,360 | | UniSTS | Human Celera Assembly | 5 | 115,797,676 - 115,797,825 | | UniSTS | Human Cytogenetic Map | 5 | q23.1 | | UniSTS |
|
QTLs in Region (Human Genome Assembly GRCh37)
| 1357383 | BW61_H | Body weight QTL 61 (human) | 2.4 | .0004 | Body weight | BMI after exercise training | 5 | 34952160 | 147315481 | Human | | 1357331 | AASTH10_H | Allergic/atopic asthma related QTL 10 (human) | 1.23 | | Reversible airflow obstruction | ETS positive | 5 | 81673046 | 155668491 | Human | | 1558696 | HRTRT7_H | Heart rate QTL 7 (human) | 1.9 | | Heart rate | | 5 | 97036470 | 123036470 | Human | | 1559396 | SCL102_H | Serum cholesterol level QTL 102 (human) | 1.59 | | Lipid level | triglyceride | 5 | 101218797 | 127218797 | Human | | 1559217 | SCL48_H | Serum cholesterol level QTL 48 (human) | 2.4 | | Lipid level | HDL cholesterol | 5 | 106101774 | 132101774 | Human | | 1643519 | BW263_H | Body Weight QTL 263 (human) | 1.5 | .00394 | Body weight | body mass index | 5 | 106101774 | 132101774 | Human | | 2292833 | MYI25_H | Myocardial infarction susceptibility QTL 25 (human) | | | Myocardial infarction susceptibility | early-onset | 5 | 106101774 | 132101774 | Human | | 2292894 | MYI26_H | Myocardial infarction susceptibility QTL 26 (human) | | | Myocardial infarction susceptibility | early-onset | 5 | 106101774 | 132101774 | Human | | 1331659 | AASTH4_H | Allergic/atopic asthma related QTL 4 (human) | 2.73 | .0002 | Reversible airflow obstruction | post-bronchodilator FEV1 | 5 | 118041132 | 144041132 | Human | | 1643241 | BW129_H | Body Weight QTL 129 (human) | .93 | .019 | Body weight | body mass index | 5 | 119101646 | 135301752 | Human | |
