Mmab (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 12 | 47,819,757 - 47,833,127 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 12 | 42,159,109 - 42,172,518 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 12 | 42,159,089 - 42,172,490 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 12 | 43,326,380 - 43,339,734 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 12 | 43,939,961 - 43,953,325 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 12 | 43,000,476 - 43,013,830 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 12 | 47,920,712 - 47,935,438 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 12 | 47,920,743 - 47,935,525 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 12 | 49,711,710 - 49,724,158 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 12 | 43,770,794 - 43,784,157 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | q16 | NCBI | | | | |
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MMAB (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 109,553,715 - 109,573,504 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 109,553,715 - 109,573,580 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 109,991,520 - 110,011,309 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 108,475,903 - 108,495,741 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 108,455,998 - 108,474,022 | NCBI | | | | | Celera | 12 | 109,615,887 - 109,635,725 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q24.11 | NCBI | | | | | HuRef | 12 | 107,009,502 - 107,029,338 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 109,959,372 - 109,979,210 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 109,528,617 - 109,548,403 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mmab (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 114,569,095 - 114,582,134 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 114,569,095 - 114,582,121 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 114,431,034 - 114,444,073 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 114,431,034 - 114,444,060 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 114,881,043 - 114,894,036 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 114,692,033 - 114,705,026 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 111,530,476 - 111,543,448 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | F | NCBI | | | | | cM Map | 5 | 55.99 | NCBI | | | | |
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Mmab (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955455 | 8,954,094 - 8,965,866 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955455 | 8,954,099 - 8,985,170 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MMAB (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 117,623,657 - 117,640,562 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 117,619,196 - 117,637,054 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 107,130,410 - 107,150,274 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 110,528,043 - 110,544,871 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 110,528,043 - 110,544,871 (-) | Ensembl | panpan1.1 | | panPan2 | |
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MMAB (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 26 | 17,519,158 - 17,531,200 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 26 | 17,519,199 - 17,529,514 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 26 | 18,272,228 - 18,284,299 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 26 | 17,861,355 - 17,873,426 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 26 | 17,861,420 - 17,871,729 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 26 | 18,481,422 - 18,493,493 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 26 | 17,851,841 - 17,863,880 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 26 | 17,869,861 - 17,881,906 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mmab (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 144,201,530 - 144,214,341 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936769 | 1,259,703 - 1,274,396 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936769 | 1,261,553 - 1,274,353 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MMAB (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 41,357,637 - 41,373,205 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 41,357,587 - 41,371,374 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 43,874,233 - 43,888,026 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MMAB (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 104,794,428 - 104,812,761 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 104,792,228 - 104,812,527 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 140,307,225 - 140,325,516 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mmab (Heterocephalus glaber - naked mole-rat) |
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