Gene: Actr2-ps1 (actin related protein 2, pseudogene 1) Rattus norvegicus |
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Analyze |
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Symbol: |
Actr2-ps1 |
Name: |
actin related protein 2, pseudogene 1 |
RGD ID: |
1595890 |
Description: |
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Type: |
pseudo
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RefSeq Status: |
MODEL |
Previously known as: |
LOC301861; similar to ARP2 actin-related protein 2 homolog (yeast) |
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 51,684,234 - 51,685,316 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 47,470,967 - 47,472,050 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 14 | 49,507,367 - 49,509,301 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 49,676,453 - 49,678,337 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 51,487,386 - 51,489,219 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 14 | 46,756,101 - 46,758,035 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q11 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (mRatBN7.2)
2313397 | Coatc1 | Coat color QTL1 | | | coat/hair pigmentation trait (VT:0010463) | coat/hair color measurement (CMO:0001808) | 14 | 18541332 | 63541332 | Rat | 738037 | Hcas6 | Hepatocarcinoma susceptibility QTL 6 | 2.93 | | liver integrity trait (VT:0010547) | liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) | 14 | 39057237 | 83368335 | Rat | 631523 | Pia13 | Pristane induced arthritis QTL 13 | 3.3 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 14 | 40793460 | 98037301 | Rat | 631839 | Niddm37 | Non-insulin dependent diabetes mellitus QTL 37 | 3.37 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 14 | 11030622 | 95876975 | Rat | 1300136 | Rf22 | Renal function QTL 22 | 3.9 | | renal blood flow trait (VT:2000006) | absolute change in renal vascular resistance (CMO:0001900) | 14 | 42262529 | 95023211 | Rat | 1300154 | Bp189 | Blood pressure QTL 189 | 3.04 | | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 14 | 30883777 | 68757901 | Rat | 1358296 | Ael3 | Aortic elastin QTL 3 | 3.7 | 0.00051 | aorta elastin amount (VT:0003905) | aortic elastin | 14 | 8267090 | 53267090 | Rat | 1581500 | Renag1 | Renal agenesis QTL 1 | | | kidney development trait (VT:0000527) | percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940) | 14 | 8170668 | 68298175 | Rat | 70187 | Pancm5 | Pancreatic morphology QTL 5 | 16.7 | | pancreas mass (VT:0010144) | pancreas weight to body weight ratio (CMO:0000630) | 14 | 30320092 | 80829842 | Rat | 70214 | Niddm28 | Non-insulin dependent diabetes mellitus QTL 28 | 4.06 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 14 | 39998251 | 75582726 | Rat | 2302045 | Pia39 | Pristane induced arthritis QTL 39 | 4.9 | 0.001 | blood immunoglobulin amount (VT:0002460) | serum immunoglobulin G2a level (CMO:0002116) | 14 | 8267090 | 53267090 | Rat | 2313048 | Bss84 | Bone structure and strength QTL 84 | 3.1 | 0.0001 | tibia strength trait (VT:1000284) | tibia total energy absorbed before break (CMO:0001736) | 14 | 37669719 | 82669719 | Rat | 10755459 | Coatc15 | Coat color QTL 15 | | 0.01681 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 14 | 19836944 | 64836944 | Rat | 2313084 | Bss83 | Bone structure and strength QTL 83 | 2.9 | 0.0001 | tibia size trait (VT:0100001) | tibia midshaft endosteal cross-sectional area (CMO:0001716) | 14 | 37669719 | 82669719 | Rat | 2313089 | Bss81 | Bone structure and strength QTL 81 | 3.4 | 0.0001 | body length (VT:0001256) | body length, nose to rump (CMO:0000079) | 14 | 37669719 | 82669719 | Rat | 2313100 | Bss82 | Bone structure and strength QTL 82 | 3 | 0.0001 | tibia size trait (VT:0100001) | tibia midshaft cross-sectional area (CMO:0001717) | 14 | 37669719 | 82669719 | Rat | |
Markers in Region
RH125883 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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mRatBN7.2 | 14 | 47,470,117 - 47,470,363 (+) | MAPPER | mRatBN7.2 | mRatBN7.2 | 17 | 43,640,369 - 43,640,609 (+) | MAPPER | mRatBN7.2 | Rnor_6.0 | 17 | 45,715,489 - 45,715,728 | NCBI | Rnor6.0 | Rnor_6.0 | 14 | 49,506,567 - 49,506,812 | NCBI | Rnor6.0 | Rnor_5.0 | 17 | 57,755,181 - 57,755,420 | UniSTS | Rnor5.0 | Rnor_5.0 | 14 | 49,675,603 - 49,675,848 | UniSTS | Rnor5.0 | RGSC_v3.4 | 14 | 51,486,536 - 51,486,781 | UniSTS | RGSC3.4 | RGSC_v3.4 | 17 | 51,294,750 - 51,294,989 | UniSTS | RGSC3.4 | Celera | 17 | 52,843,695 - 52,843,934 | UniSTS | | Celera | 14 | 46,755,301 - 46,755,546 | UniSTS | | Cytogenetic Map | 14 | q11 | UniSTS | |
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Expression
Sequence
RefSeq Acc Id: |
XM_003751364 ⟹ XP_003751412 |
Type: |
CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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Rnor_5.0 | 14 | 49,676,453 - 49,678,337 (+) | NCBI |
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RefSeq Acc Id: |
XM_003752732 ⟹ XP_003752780 |
Type: |
CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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Celera | 14 | 46,756,151 - 46,758,035 (+) | NCBI |
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2022-06-10 |
Actr2-ps1 |
actin related protein 2, pseudogene 1 |
LOC301861 |
similar to ARP2 actin-related protein 2 homolog (yeast) |
Symbol and Name Changed |
1299863 |
APPROVED |
2008-05-28 |
LOC301861 |
similar to ARP2 actin-related protein 2 homolog (yeast) |
LOC301861 |
similar to ARP2 actin-related protein 2 homolog (yeast) (predicted) |
'predicted' is removed from gene name |
2292626 |
APPROVED |
2006-11-20 |
LOC301861 |
similar to ARP2 actin-related protein 2 homolog (yeast) (predicted) |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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