Gene: Ranbp1-ps2 (RAN binding protein 1, pseudogene 2) Rattus norvegicus |
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Analyze |
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Symbol: |
Ranbp1-ps2 |
Name: |
RAN binding protein 1, pseudogene 2 |
RGD ID: |
1595714 |
Description: |
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Type: |
pseudo (Ensembl: processed_pseudogene)
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RefSeq Status: |
MODEL |
Previously known as: |
ENSRNOG00000064929; LOC498127; similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RanBP1) |
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 12 | 6,867,362 - 6,868,143 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 12 | 2,069,524 - 2,070,189 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 12 | 2,069,580 - 2,070,041 (-) | Ensembl | | mRatBN7.2 Ensembl | | | mRatBN7.2 Ensembl | 12 | 2,069,580 - 2,070,041 (-) | NCBI | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 12 | 3,499,817 - 3,500,496 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 12 | 5,642,413 - 5,643,077 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 12 | 2,075,241 - 2,075,850 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 12 | 3,921,480 - 3,922,159 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (mRatBN7.2)
1300174 | Bw15 | Body weight QTL 15 | 2.93 | | body mass (VT:0001259) | body weight loss (CMO:0001399) | 12 | 1 | 9318387 | Rat | 2312418 | Kidm41 | Kidney mass QTL 41 | 3.7 | 0.0001 | kidney mass (VT:0002707) | single kidney wet weight to body weight ratio (CMO:0000622) | 12 | 1 | 19611090 | Rat | 10755457 | Coatc14 | Coat color QTL 14 | | 0.01759 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 12 | 1 | 22591684 | Rat | 6893681 | Bw109 | Body weight QTL 109 | 2.3 | 0.004 | body mass (VT:0001259) | body weight (CMO:0000012) | 12 | 1 | 23297788 | Rat | 1581516 | Cm56 | Cardiac mass QTL 56 | 4.2 | 0.05 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 12 | 1 | 29333307 | Rat | 1598855 | Bp294 | Blood pressure QTL 294 | 3.5 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 12 | 1 | 34851688 | Rat | 7411660 | Foco28 | Food consumption QTL 28 | 10.9 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 1 | 42110980 | Rat | 9590086 | Insglur6 | Insulin/glucose ratio QTL 6 | 18.97 | 0.001 | blood insulin amount (VT:0001560) | calculated plasma insulin level (CMO:0002170) | 12 | 1 | 42110980 | Rat | 8694179 | Bw150 | Body weight QTL 150 | 2.9 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 12 | 1 | 42110980 | Rat | 7411586 | Foco5 | Food consumption QTL 5 | 5.4 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 1 | 42110980 | Rat | 7411595 | Foco9 | Food consumption QTL 9 | 4 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 1 | 42110980 | Rat | 7411545 | Bw128 | Body weight QTL 128 | 5.2 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 12 | 1 | 42110980 | Rat | 9590147 | Scort7 | Serum corticosterone level QTL 7 | 13.61 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 12 | 1 | 42110980 | Rat | 2303575 | Insul14 | Insulin level QTL 14 | 4 | | blood insulin amount (VT:0001560) | blood insulin level (CMO:0000349) | 12 | 1 | 42450532 | Rat | 737979 | Pia22 | Pristane induced arthritis QTL 22 | 53.1 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 12 | 1 | 44465750 | Rat | 634351 | Apr5 | Acute phase response QTL 5 | 6.7 | | blood interleukin-6 amount (VT:0008595) | plasma interleukin-6 level (CMO:0001927) | 12 | 1 | 44503507 | Rat | 2302042 | Pia38 | Pristane induced arthritis QTL 38 | 3.5 | 0.001 | blood immunoglobulin amount (VT:0002460) | serum immunoglobulin G1 level (CMO:0002115) | 12 | 1 | 44503507 | Rat | 7243862 | Mcs30 | Mammary carcinoma susceptibility QTL 30 | 8.62 | | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 12 | 797729 | 8525593 | Rat | 634350 | Apr4 | Acute phase response QTL 4 | 6 | | orosomucoid 1 amount (VT:0010541) | plasma orosomucoid 1 level (CMO:0001467) | 12 | 1172005 | 46172005 | Rat | |
Markers in Region
Ranbp1 |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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mRatBN7.2 | 13 | 16,719,954 - 16,720,426 (+) | MAPPER | mRatBN7.2 | mRatBN7.2 | 12 | 2,069,639 - 2,070,119 (+) | MAPPER | mRatBN7.2 | Rnor_6.0 | 12 | 3,499,932 - 3,500,411 | NCBI | Rnor6.0 | Rnor_6.0 | 13 | 20,446,004 - 20,446,475 | NCBI | Rnor6.0 | Rnor_5.0 | 13 | 25,647,455 - 25,647,926 | UniSTS | Rnor5.0 | Rnor_5.0 | 12 | 5,642,528 - 5,643,007 | UniSTS | Rnor5.0 | RGSC_v3.4 | 13 | 6,284,035 - 6,284,506 | UniSTS | RGSC3.4 | RGSC_v3.4 | 12 | 2,075,301 - 2,075,780 | UniSTS | RGSC3.4 | Celera | 12 | 3,921,595 - 3,922,074 | UniSTS | | Celera | 13 | 16,744,718 - 16,745,189 | UniSTS | | Cytogenetic Map | 12 | p12 | UniSTS | | Cytogenetic Map | 13 | p13 | UniSTS | | Cytogenetic Map | 11 | q23 | UniSTS | |
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Expression
Sequence
RefSeq Acc Id: |
ENSRNOT00000102175 |
Type: |
CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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mRatBN7.2 Ensembl | 12 | 2,069,580 - 2,070,041 (-) | Ensembl |
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2022-06-10 |
Ranbp1-ps2 |
RAN binding protein 1, pseudogene 2 |
LOC498127 |
similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RanBP1) |
Symbol and Name Changed |
1299863 |
APPROVED |
2022-06-02 |
LOC498127 |
similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RanBP1) |
ENSRNOG00000064929 |
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Data merged from RGD:150345186 |
737654 |
PROVISIONAL |
2021-08-31 |
ENSRNOG00000064929 |
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Symbol and Name status set to provisional |
45752 |
PROVISIONAL |
2006-11-20 |
LOC498127 |
similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RanBP1) |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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