Gene: Spdef (SAM pointed domain containing ets transcription factor)  Rattus norvegicus

Symbol: Spdef
Name: SAM pointed domain containing ets transcription factor
Description: ENCODES a protein that exhibits sequence-specific DNA binding (inferred); sequence-specific DNA binding transcription factor activity (inferred); INVOLVED IN intestinal epithelial cell development (ortholog); lung goblet cell differentiation (ortholog); negative regulation of cell fate commitment (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN nucleus (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; cadmium dichloride; diuron
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC689210; loc689210; SAM pointed domain containing ets transcription factor; SAM pointed domain-containing Ets transcription factor; similar to SAM pointed domain containing ets transcription factor; similar to sam pointed domain containing ets transcription factor
Orthologs: Homo sapiens : SPDEF (SAM pointed domain containing ets transcription factor)  HGNC
Mus musculus : Spdef (SAM pointed domain containing ets transcription factor)  MGI
Latest Assembly: RGSC Genome Assembly v3.4
Position:
MapChrPositionStrandSource
Rat Cytogenetic Map20p12 NCBI
RGSC Genome Assembly v5.0209,495,176 - 9,509,626-NCBI
RGSC Genome Assembly v3.4205,927,866 - 5,942,091-NCBI
Rat Celera Assembly207,333,751 - 7,348,087-NCBI
Model

Launch Genome Browser (GBrowse)


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (RGSC Genome Assembly v3.4)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Spdef
Entrez Gene
Ensembl Gene
Genome Browser
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1594842
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2013-04-16
Status: ACTIVE