Tektip1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 8,996,403 - 8,998,165 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 8,345,667 - 8,347,429 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 8,345,303 - 8,347,429 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 11,231,245 - 11,233,004 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 13,106,732 - 13,108,491 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 10,974,393 - 10,976,151 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 11,215,328 - 11,217,090 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 11,215,328 - 11,217,090 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 11,382,219 - 11,383,981 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 9,830,206 - 9,831,968 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 7 | 6,534,730 - 6,536,492 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q11 | NCBI | | | | |
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TEKTIP1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 19 | 3,539,174 - 3,544,030 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 3,539,171 - 3,544,030 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 3,539,172 - 3,544,028 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 3,488,848 - 3,495,991 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 19 | 3,475,965 - 3,480,838 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.3 | NCBI | | | | | HuRef | 19 | 3,304,718 - 3,309,400 (+) | NCBI | | HuRef | | | CHM1_1 | 19 | 3,538,825 - 3,543,696 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 3,517,345 - 3,522,201 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tektip1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 81,199,858 - 81,201,654 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 81,198,901 - 81,201,650 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 81,364,024 - 81,365,820 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 81,363,067 - 81,365,816 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 80,826,769 - 80,828,565 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 80,767,178 - 80,768,919 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 82,385,057 - 82,386,853 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | C1 | NCBI | | | | | cM Map | 10 | 39.72 | NCBI | | | | |
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Tektip1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955495 | 5,505,349 - 5,507,412 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955495 | 5,504,867 - 5,507,412 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TEKTIP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 20 | 7,936,957 - 7,941,765 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 7,168,579 - 7,173,473 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 2,565,115 - 2,569,898 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 3,514,826 - 3,519,754 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 3,514,825 - 3,519,717 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TEKTIP1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 55,863,810 - 55,866,444 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 55,863,812 - 55,866,373 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 55,588,135 - 55,590,897 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 56,522,931 - 56,525,693 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 56,523,087 - 56,525,621 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 55,578,609 - 55,581,371 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 56,062,014 - 56,064,776 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 56,260,757 - 56,263,520 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tektip1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 215,823,399 - 215,825,431 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936588 | 2,009,415 - 2,011,363 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936588 | 2,009,306 - 2,011,363 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TEKTIP1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 75,118,832 - 75,122,026 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 75,118,851 - 75,122,464 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 75,776,444 - 75,779,474 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TEKTIP1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 6 | 3,302,165 - 3,307,687 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 3,302,771 - 3,307,664 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666081 | 5,184,609 - 5,191,747 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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