Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | bipolar disorder | | ISO | STARD9 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:31043756 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | bipolar disorder | | ISO | STARD9 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:31043756 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | GOA pipeline | RGD automated data pipeline |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Stard9 (Rattus norvegicus - Norway rat) |
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STARD9 (Homo sapiens - human) |
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Stard9 (Mus musculus - house mouse) |
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Stard9 (Chinchilla lanigera - long-tailed chinchilla) |
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STARD9 (Pan paniscus - bonobo/pygmy chimpanzee) |
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STARD9 (Canis lupus familiaris - dog) |
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Stard9 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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STARD9 (Sus scrofa - pig) |
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STARD9 (Chlorocebus sabaeus - green monkey) |
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Stard9 (Heterocephalus glaber - naked mole-rat) |
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Variants in Stard9
302 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 10 | 7 | 2 | 4 | 4 | 1 | 2 | 26 | 11 | 4 | |||
Low | 3 | 33 | 35 | 26 | 17 | 26 | 4 | 7 | 73 | 33 | 15 | 4 | |
Below cutoff | 15 | 15 | 15 |
RefSeq Acc Id: | ENSRNOT00000048141 ⟹ ENSRNOP00000039716 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000079109 ⟹ ENSRNOP00000075178 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000094825 ⟹ ENSRNOP00000093096 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001427830 ⟹ NP_001414759 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_001080099 ⟹ XP_001080099 | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006234817 ⟹ XP_006234879 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017592209 ⟹ XP_017447698 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017592211 ⟹ XP_017447700 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039106809 ⟹ XP_038962737 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039106810 ⟹ XP_038962738 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039106814 ⟹ XP_038962742 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063284596 ⟹ XP_063140666 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005502955 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XR_010064698 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010064699 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010064700 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XP_001080099 ⟸ XM_001080099 |
- Peptide Label: | isoform X4 |
- UniProtKB: | D3Z9J4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006234879 ⟸ XM_006234817 |
- Peptide Label: | isoform X6 |
- UniProtKB: | A0A8I6GKI2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017447698 ⟸ XM_017592209 |
- Peptide Label: | isoform X1 |
- UniProtKB: | D3Z9J4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017447700 ⟸ XM_017592211 |
- Peptide Label: | isoform X7 |
- UniProtKB: | A0A8I6GKI2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000075178 ⟸ ENSRNOT00000079109 |
RefSeq Acc Id: | ENSRNOP00000039716 ⟸ ENSRNOT00000048141 |
RefSeq Acc Id: | XP_038962738 ⟸ XM_039106810 |
- Peptide Label: | isoform X3 |
- UniProtKB: | D3Z9J4 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038962737 ⟸ XM_039106809 |
- Peptide Label: | isoform X2 |
- UniProtKB: | D3Z9J4 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038962742 ⟸ XM_039106814 |
- Peptide Label: | isoform X8 |
- UniProtKB: | A0A8I6GKI2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000093096 ⟸ ENSRNOT00000094825 |
RefSeq Acc Id: | XP_063140666 ⟸ XM_063284596 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | NP_001414759 ⟸ NM_001427830 |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13692347 | ||||||||
Promoter ID: | EPDNEW_R2870 | ||||||||
Type: | single initiation site | ||||||||
Name: | Stard9_1 | ||||||||
Description: | StAR-related lipid transfer domain containing 9 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1593360 | AgrOrtholog |
BioCyc Gene | G2FUF-48158 | BioCyc |
Ensembl Genes | ENSRNOG00000010050 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000048141.6 | UniProtKB/TrEMBL |
ENSRNOT00000079109.2 | UniProtKB/TrEMBL | |
ENSRNOT00000094825.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 2.60.200.20 | UniProtKB/TrEMBL |
3.30.530.20 | UniProtKB/TrEMBL | |
3.40.850.10 | UniProtKB/TrEMBL | |
InterPro | FHA_dom | UniProtKB/TrEMBL |
Kinesin_motor_CS | UniProtKB/TrEMBL | |
Kinesin_motor_dom | UniProtKB/TrEMBL | |
Kinesin_motor_dom_sf | UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/TrEMBL | |
SMAD_FHA_domain | UniProtKB/TrEMBL | |
START-like_dom | UniProtKB/TrEMBL | |
START_lipid-bd_dom | UniProtKB/TrEMBL | |
NCBI Gene | 691920 | ENTREZGENE |
PANTHER | PTHR47117 | UniProtKB/TrEMBL |
STAR-RELATED LIPID TRANSFER PROTEIN 9 | UniProtKB/TrEMBL | |
Pfam | FHA | UniProtKB/TrEMBL |
Kinesin | UniProtKB/TrEMBL | |
START | UniProtKB/TrEMBL | |
PhenoGen | Stard9 | PhenoGen |
PRINTS | KINESINHEAVY | UniProtKB/TrEMBL |
PROSITE | FHA_DOMAIN | UniProtKB/TrEMBL |
KINESIN_MOTOR_DOMAIN1 | UniProtKB/TrEMBL | |
KINESIN_MOTOR_DOMAIN2 | UniProtKB/TrEMBL | |
START | UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000010050 | RatGTEx |
SMART | FHA | UniProtKB/TrEMBL |
KISc | UniProtKB/TrEMBL | |
Superfamily-SCOP | Bet v1-like | UniProtKB/TrEMBL |
SMAD_FHA | UniProtKB/TrEMBL | |
SSF52540 | UniProtKB/TrEMBL | |
UniProt | A0A0G2K9Y3_RAT | UniProtKB/TrEMBL |
A0A8I6GKI2 | ENTREZGENE, UniProtKB/TrEMBL | |
D3Z9J4 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2015-11-12 | Stard9 | StAR-related lipid transfer domain containing 9 | Stard9 | StAR-related lipid transfer (START) domain containing 9 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2015-07-21 | Stard9 | StAR-related lipid transfer (START) domain containing 9 | LOC691920 | similar to kinesin-like motor protein C20orf23 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2013-05-24 | LOC691920 | similar to kinesin-like motor protein C20orf23 | LOC100363887 | START domain containing 9-like | Data merged from RGD:2322169 | 1643240 | APPROVED |
2010-05-06 | LOC100363887 | START domain containing 9-like | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2008-01-09 | LOC691920 | similar to kinesin-like motor protein C20orf23 | LOC688021 | similar to kinesin-like motor protein C20orf23 | Data merged from RGD:1593641 | 1643240 | APPROVED |
2006-11-20 | LOC691920 | similar to kinesin-like motor protein C20orf23 | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2006-11-20 | LOC688021 | similar to kinesin-like motor protein C20orf23 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |