Aurka-ps2 (aurora kinase A, pseudogene 2) - Rat Genome Database

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Gene: Aurka-ps2 (aurora kinase A, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Aurka-ps2
Name: aurora kinase A, pseudogene 2
RGD ID: 1588531
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC363527; similar to serine/threonine protein kinase 6
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8102,709,440 - 2,711,648 (+)NCBIGRCr8
mRatBN7.2102,202,745 - 2,204,008 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0101,737,209 - 1,739,808 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010626,557 - 628,807 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4101,447,743 - 1,485,965 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1011,127,331 - 11,130,041 (+)NCBICelera
Cytogenetic Map10q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat

Markers in Region
RH141368  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2102,202,683 - 2,202,870 (+)MAPPERmRatBN7.2
mRatBN7.210529,094 - 529,279 (+)MAPPERmRatBN7.2
Rnor_6.010546,820 - 547,004NCBIRnor6.0
Rnor_6.0101,738,082 - 1,738,266NCBIRnor6.0
Rnor_5.01011,229,516 - 11,229,700UniSTSRnor5.0
Rnor_5.010626,929 - 627,113UniSTSRnor5.0
RGSC_v3.4101,448,851 - 1,449,037UniSTSRGSC3.4
RGSC_v3.410449,522 - 449,706UniSTSRGSC3.4
Celera1011,128,315 - 11,128,499UniSTS
Cytogenetic Map10q11UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_001845115
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1011,127,331 - 11,130,041 (+)NCBI
Sequence:
RefSeq Acc Id: XR_006462
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0101,737,209 - 1,739,808 (+)NCBI
Rnor_5.010626,557 - 628,807 (+)NCBI
RGSC_v3.4101,447,743 - 1,485,965 (-)RGD
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-26201 BioCyc
NCBI Gene 363527 ENTREZGENE
PhenoGen Aurka-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Aurka-ps2  aurora kinase A, pseudogene 2  LOC363527  similar to serine/threonine protein kinase 6  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC363527  similar to serine/threonine protein kinase 6      Symbol and Name status set to provisional 70820 PROVISIONAL