Sdad1-ps2 (SDA1 domain containing 1, pseudogene 2) - Rat Genome Database

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Gene: Sdad1-ps2 (SDA1 domain containing 1, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Sdad1-ps2
Name: SDA1 domain containing 1, pseudogene 2
RGD ID: 1588521
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC364811; similar to SDA1 domain containing 1
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8182,337,400 - 2,339,424 (-)NCBIGRCr8
mRatBN7.2182,064,606 - 2,066,630 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0182,234,054 - 2,236,130 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0182,266,800 - 2,268,824 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,379,605 - 2,381,629 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera181,941,482 - 1,943,558 (-)NCBICelera
Cytogenetic Map18p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Sdad1-ps2
14 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-8391 BioCyc
NCBI Gene 364811 ENTREZGENE
PhenoGen Sdad1-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Sdad1-ps2  SDA1 domain containing 1, pseudogene 2  LOC364811  similar to SDA1 domain containing 1  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC364811  similar to SDA1 domain containing 1      Symbol and Name status set to provisional 70820 PROVISIONAL