Gene: Polr2a (RNA polymerase II subunit A) Rattus norvegicus
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Symbol: Polr2a
Name: RNA polymerase II subunit A
Description: ENCODES a protein that exhibits core promoter binding (ortholog); DNA binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to oxygen levels; response to organic cyclic compound; DNA-templated transcription, termination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; Huntington disease pathway; purine metabolic pathway; ASSOCIATED WITH Infarction; FOUND IN nucleus; DNA-directed RNA polymerase II, core complex (ortholog); nuclear euchromatin (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 3H-1,2-dithiole-3-thione; benzo[a]pyrene
Type: protein-coding
RefSeq Status: MODEL
Also known as: DNA-directed RNA polymerase II subunit RPB1; Polr2a_mapped; Polymerase (RNA II (DNA directed), large polypeptide; polymerase (RNA) II (DNA directed) polypeptide A; polymerase (RNA) II (DNA directed) polypeptide A (mapped); polymerase (RNA) II (DNA directed) polypeptide A, 220kDa; polymerase (RNA) II subunit A; Rpo2-1
Orthologs:
Homo sapiens (human) : POLR2A (RNA polymerase II subunit A)  HGNC  AGR
Mus musculus (house mouse) : Polr2a (polymerase (RNA) II (DNA directed) polypeptide A)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Polr2a (RNA polymerase II subunit A)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR2A (RNA polymerase II subunit A)
Canis lupus familiaris (dog) : POLR2A (RNA polymerase II subunit A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr2a (RNA polymerase II subunit A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01056,339,277 - 56,364,888 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01056,084,677 - 56,110,778 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,552,872 - 56,579,172 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1053,606,814 - 53,632,373 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Polr2a
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1587326
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2017-11-07
Status: ACTIVE