Gene: Polr2a (RNA polymerase II subunit A) Rattus norvegicus
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Symbol: Polr2a
Name: RNA polymerase II subunit A
Description: ENCODES a protein that exhibits core promoter binding (ortholog); DNA binding (ortholog); poly(A) RNA binding (ortholog); INVOLVED IN cellular response to oxygen levels; response to organic cyclic compound; DNA-templated transcription, termination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; Huntington disease pathway; purine metabolic pathway; ASSOCIATED WITH Infarction; FOUND IN nucleus; DNA-directed RNA polymerase II, core complex (ortholog); nuclear euchromatin (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 3H-1,2-dithiole-3-thione; benzo[a]pyrene
Type: protein-coding
RefSeq Status: MODEL
Also known as: DNA-directed RNA polymerase II subunit RPB1; Polr2a_mapped; Polymerase (RNA II (DNA directed), large polypeptide; polymerase (RNA) II (DNA directed) polypeptide A; polymerase (RNA) II (DNA directed) polypeptide A (mapped); polymerase (RNA) II (DNA directed) polypeptide A, 220kDa; polymerase (RNA) II subunit A; Rpo2-1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01056,339,277 - 56,364,888 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01056,084,677 - 56,110,778 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41056,552,872 - 56,579,172 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1053,606,814 - 53,632,373 (-)NCBI
Cytogenetic Map10q24NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Polr2a
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1587326
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2016-11-18
Status: ACTIVE