Nsrp1-ps1 (nuclear speckle splicing regulatory protein 1, pseudogene 1) - Rat Genome Database

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Gene: Nsrp1-ps1 (nuclear speckle splicing regulatory protein 1, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Nsrp1-ps1
Name: nuclear speckle splicing regulatory protein 1, pseudogene 1
RGD ID: 1586477
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical protein LOC688623; LOC688623
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82048,875,284 - 48,877,606 (-)NCBIGRCr8
mRatBN7.22047,292,772 - 47,294,962 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.02048,792,156 - 48,793,758 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02050,435,644 - 50,437,376 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42047,730,267 - 47,731,869 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2052,698,458 - 52,700,060 (+)NCBICelera
Cytogenetic Map20q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Nsrp1-ps1
18 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)20260683647606836Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202510672254435887Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202510672254435887Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202510672254435887Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202520973454435887Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202924438854435887Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3310 BioCyc
NCBI Gene 688623 ENTREZGENE
PhenoGen Nsrp1-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Nsrp1-ps1  nuclear speckle splicing regulatory protein 1, pseudogene 1  LOC688623  hypothetical protein LOC688623  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC688623  hypothetical protein LOC688623      Symbol and Name status set to provisional 70820 PROVISIONAL