Nid2-ps14 (nidogen 2, pseudogene 14) - Rat Genome Database

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Gene: Nid2-ps14 (nidogen 2, pseudogene 14) Rattus norvegicus
Analyze
Symbol: Nid2-ps14
Name: nidogen 2, pseudogene 14
RGD ID: 1586098
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC365085; LOC503361; LOC689940; nidogen-2-like; similar to MIC2 like 1; similar to nidogen 2; uncharacterized protein LOC365085
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr845,092,471 - 5,111,300 (-)NCBIGRCr8
mRatBN7.29534,980 - 555,257 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.02156,622,791 - 156,807,695 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02176,149,728 - 176,165,419 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map9q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Nid2-ps14
443 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008761072   ⟹   XP_008759294
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02156,778,180 - 156,807,695 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001836740
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02156,622,791 - 156,780,483 (-)NCBI
Sequence:
RefSeq Acc Id: XR_591122
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02156,622,791 - 156,721,326 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-28580 BioCyc
NCBI Gene 365085 ENTREZGENE
PhenoGen Nid2-ps14 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Nid2-ps14  nidogen 2, pseudogene 14  LOC365085  similar to nidogen 2  Symbol and Name Changed 1299863 APPROVED
2015-07-29 LOC365085  similar to nidogen 2  LOC689940  similar to MIC2 like 1  Data merged from RGD:1586360 737654 PROVISIONAL
2015-07-29 LOC365085  similar to nidogen 2  LOC503361  similar to nidogen 2  Data merged from RGD:1595632 737654 PROVISIONAL
2006-11-20 LOC503361  similar to nidogen 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC689940  similar to MIC2 like 1      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC365085  similar to nidogen 2      Symbol and Name status set to provisional 70820 PROVISIONAL