Rpl5-ps8 (ribosomal protein L5, pseudogene 8) - Rat Genome Database

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Gene: Rpl5-ps8 (ribosomal protein L5, pseudogene 8) Rattus norvegicus
Analyze
Symbol: Rpl5-ps8
Name: ribosomal protein L5, pseudogene 8
RGD ID: 1584020
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC690150; similar to 60S ribosomal protein L5
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr877,002,923 - 7,003,823 (-)NCBIGRCr8
mRatBN7.276,352,111 - 6,353,011 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0716,525,999 - 16,526,908 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0716,690,180 - 16,691,080 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.477,790,404 - 7,791,304 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera74,584,402 - 4,585,311 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Rpl5-ps8
6 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7131962314Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134000259Rat
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7127829089Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35107 BioCyc
NCBI Gene 690150 ENTREZGENE
PhenoGen Rpl5-ps8 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Rpl5-ps8  ribosomal protein L5, pseudogene 8  LOC690150  similar to 60S ribosomal protein L5  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC690150  similar to 60S ribosomal protein L5      Symbol and Name status set to provisional 70820 PROVISIONAL