Gene: Magea10-ps5 (MAGE family member A10, pseudogene 5) Rattus norvegicus |
|
Analyze |
|
Symbol: |
Magea10-ps5 |
Name: |
MAGE family member A10, pseudogene 5 |
RGD ID: |
1566060 |
Description: |
|
Type: |
pseudo (Ensembl: protein-coding)
|
RefSeq Status: |
MODEL |
Previously known as: |
ENSRNOG00000064790; LOC302645; melanoma-associated antigen 10-like; RGD1566060; similar to Magea5 |
RGD Orthologs |
|
Alliance Genes |
|
No known orthologs.
More Info |
homologs ...
|
More Info |
|
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | X | 44,216,713 - 44,226,184 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 40,363,481 - 40,374,806 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 40,373,522 - 40,374,469 (+) | Ensembl | | mRatBN7.2 Ensembl | | | mRatBN7.2 Ensembl | X | 40,373,522 - 40,374,469 (+) | NCBI | | mRatBN7.2 Ensembl | | | Rnor_6.0 | X | 43,298,497 - 43,310,965 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | X | 43,603,865 - 43,613,351 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 61,861,010 - 61,861,973 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 41,047,309 - 41,049,206 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q21 | NCBI | | | | |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
References
Genomics
QTLs in Region (mRatBN7.2)
731181 | Uae27 | Urinary albumin excretion QTL 27 | 2.7 | 0.0059 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | X | 1 | 43491017 | Rat | 1298071 | Edpm12 | Estrogen-dependent pituitary mass QTL 12 | 3.2 | | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | X | 2927898 | 47927898 | Rat | 10755455 | Coatc13 | Coat color QTL 13 | | 0 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 7 | 4406000 | 49406000 | Rat | 631666 | Iddm5 | Insulin dependent diabetes mellitus QTL 5 | | | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | X | 4494549 | 49494549 | Rat | 61430 | Cia18 | Collagen induced arthritis QTL 18 | 3.1 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | X | 14843113 | 120568734 | Rat | 71116 | Niddm16 | Non-insulin dependent diabetes mellitus QTL 16 | 7.81 | | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | X | 15297802 | 60297802 | Rat | 1598873 | Memor2 | Memory QTL 2 | 2.5 | | exploratory behavior trait (VT:0010471) | average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) | X | 20990947 | 41052531 | Rat | 2290375 | Gluco34 | Glucose level QTL 34 | 2.75 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | X | 20990947 | 41203591 | Rat | |
Expression
Sequence
RefSeq Acc Id: |
XM_008758421 ⟹ XP_008756643 |
Type: |
CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
---|
Celera | X | 41,047,309 - 41,049,206 (+) | NCBI |
|
Sequence: |
GATCATAGAAGACACCACTTACTGGGGTATTGTTACCCCGCACCCCCACAGTAGACATTATCAG TACTGTTAATGAAAATTCAGTCACAAACTAGCAGTTTGAATCTGTGGAATGTGGTCAGCATGTC TTAATGATTTGAAACTCAAAGATATGAAAATCTTCCTCTGGGATAGTGTCCTCAGATCCTGTAA CCGGGGCACAAGTATCTATCCTCAGAATTTATGGGGATGTAGATACTGCAAGTATATAACAATG GTTCAAACAGTTGAGAACATGAACACCCGACATTCTCTGGCATCAAATATTCTGGTGGTATCCC TGAGCTTATCTTCCCTCTGACTGCACCCCAAATAGGTTGTTCATTTTCTGTTTCTGTATTTCAA GGTTCTCAGACTGCTATGAGTCCTTGTAGCCTAGAGCACTATTCAGAGGTTTTGAATAACATGA CTTTTCGCAGGTTGTTCGACTGTGACTGCAAATAGAATCCATAAACTCTCTCCACTTTCCCACC AGGTCTGTGTCCTCCTTGTTCTGATTAGGACAGTATCCAGCCTGTCTGTACCAAGGAAAACCAC AATGGATGATGCCCATAACATCCAATACAGCAACCTCCAAGACAATGCTCAGGCCGAACAGGAG TTGGACAATGCCCAGGCTACCATGGCTGCAGCAGAGGAGGAAGAAGCCACCTCCACCTCAAAGG CCGAGTATGGTAGTGGAATACCAAGTCCTCTCCAGAGTCCTGAGAGAGCCTGCTCTCCCTCTGT GGCACTGGCCTCCATTCCTGTAGGCCCATCTGAGGAGGCTTCCATCAGACAATTAGAGGCGCTG GAAGACCCACTCTATTTGTTGCACAATGCACAGAACGTAAAGGTGTATGATTTGGTGGACTTTC TGCTTTTCAAATATCAAACGAAGGCATTCACTACCAAAGCAGAAATGCTGGAAACCATTGGTAG AGAGTATGATGAATATTATCCTCTGATCTTTAGTGAGGCCTCTGAGTGCATGAAGCTGGTCTTT GGCCTTGACATAGTAGAAGTGGACCCTTCTGTCCATTCCTATGTCCTTGTCACTGCCCTGGGCA TCACCTATGATGGGATGCTGACTGATGTCCAGGGTATGCCCAAGACAGGTGTCCTCATAGTTGT ACTGGGTGTCATTTTTATGAAGGGAAACTATGTCAGTGAGGACATTATCTGGGAAATGCTGAAT AATATAGGGTTGTGTGGTGGGATGGATCCTTACATACATAGAGACCCCAGGAAGCTCATCTCTG AGGAGTTTGTCCAGGAAGGGTACCTGGAATACAGACAGGTGCCTAACAGTGATCCTCCTAGCCA TGTGTTCCTGTGGGGCCCAAGGGCCTTTGCAGAAACCACCAAATTGAAAGTCTTGCAGTTTTTT GCTAGCATTACTAAGACTCATCCCAGAGCATACCCTGAAAAATATGCAGAAGCTCTGAGAGATG AGATAGACAGGGTCGAGGCCTGGATCTTCAGCAGATGCTTCGACATCTCTGATCTGGGCACTGT CTAGTGCACTGGCAATTCATATCTAACATCAGGTCAGACAGAGTAGTCACTGATCCAGCTATTG TACCCTCAACTGGGAGCTGGTGGGAGGAGAGCATAAAGCTTTCTATGTTTATTCTATTTGGGTG ACTTTAGGATTCTTGGCATTTCAAAATGTTAATACTCTTATTATAAGTTGCATTATGTTCAAGT TTAATCTTTTTGCAATGCATGCATTCTTGTTTTCCAGATTTGAAACTGCATGAGGATGACTTCT GTCTGTCTTTGTAAAATGTCCCAACCTACTAGTACACTGAAATTGGAATTAAGTTGGTAATGGA AAAAATCTCAGCTTTAACTTGTAAAACAAGAATAAAATAAA
hide sequence
|
RefSeq Acc Id: |
XM_017602297 ⟹ XP_017457786 |
Type: |
CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
---|
Rnor_6.0 | X | 43,298,497 - 43,310,965 (+) | NCBI |
|
Sequence: |
AAATAGGTAGCTAAGACTAGACTGTGAAAACAGTGGTTGGACCAAAGTCACCGGATCATATGGT GTTAACAATATAACCTCACCAAATTGGGTCAGCTGCGAGGGAATGAGCGCCTAATCTACTTGTC CAGGACTGTCCTTGGGCACCATTTCCAGTGTTCCCAGAAATGCGTGACGGTGTGACATTTTTAT TCTGATGCAAAGTGGATGTGTAGGTTATTTAAGCTGGATCCAAGGACCACAGGCCCCGACAAAT GAGGTAGATGTTTGTCGTTTTGGGGTCCTGAAGCAAACAGAGCCCCATTCTCGAAAGACTCTTG TTCTGGTTTCCATATCCGAGGAGTCCGCAGGCTGAGGGCCATTTGCCGAGGTCCATTGAGTTTA AATGATGCTCGGTGCTGACCTGGTAGTATATGAGACACTCCACAGTCATCTATATCTAGCGACA TAGGGGGCCGCGAGAACATTTTTGAGTTTCCTAAGTTTAAAGGAACCTCTGCGCTGATTTGTGA GATAGAGCGCCTCCCCAGGCTTTCATAGGTGGTGATCTTGTGCACTCAGCGCCATTTTGTCAGA CGCCTAGAAGGGTGGTCGCCTCGCTGTTACAGTTGAGGTAAGAATTTCAGGCTCGCTCTCAAAC CTTCATGGACAGACAGTTCCTAAATAATAGTGCTTCACCCTTTTAGTCTGCTTAGTTCGCAGTC AGGTAACTTTGTGTGAACTAGCTCCTTACTCCTGGATTCTAGAGATGGACTAAAGTCACTGGAA ACTTTCCCTGAGGAAAAGCGATGGAATACTTGGCCATTTCATACAGGTAGCTAAGACTAGACGG TGAAAACAGTGGTTGGACCAAAGCCACCCAGATCATATGCTGTTAATAATATAACCTCACCAAA CGGGGGCAGCAGCGTGGGAATGAACCCCTAGTCTACTTTATCCCGGACTCTGTCCTTGGGCACC ATTTCTGATGTTCCCAAAATGCCTGAGCATGTAAAGTCGAAGAGTAGGTTGTTTAAGGTGGATC CAAGAACCACAGGCTCAGACAAACTACTTTTGTATCATTTTGGGATCTGGACTTAAACGTGAGC CCCATTACCGGACATAGCTTGGGCCCCAGTCTCCTTGTTGGTGAACAGGACTGTTTTTTGACGT TTCCCGAGATTAAGGGATGCCTCAGTGAGGACTTGGCCATGTGAGTCCCTCTGCAGTCATATAT TTCGTAACACGGGGACTGCGGGAACATTTTGAGTTTCCTGAGGCCTAAAGGAACCTCTGGGCTG ATTTGTGGAACAGAGCGCCTCCCCAGGCTTTCGCAGATGGTGATCTTGTGCACTCAGCGCCATT TTGTCAGAGGCCTAGAAGGGAGGTCGCCTCGCTGTTACAGTTGAGGTAAGAATTTCAGGCTCGC TCTGAAACCTTCATGGACAGACAGTTCCTAAATAATAGTGCTTCACCCTTTTAGTCTGCTTAGT TCGCAGTCAGGTAACTTTGTGTGAACTAGCTCCTTACTCCTCGATTCTAGGGATGGTCTAAAGT CACTGGAAACTTTCCCTGAGGAAAAGCGATGGAATAGTTGGCCATTTCAAACAGGTAGCTAAGA CTAGACTGTGAAAACAGTGGTTGGACCAAAGCCACCCAGATCATATGGTGTTAATAATATAACC TCACCAAACGGGGGCAGCAGCGTGGGAATAAACCCCTAGTCTACTTTATCCCGGACTCTGTCCT TGGGCACCATTTCTGATGTTCCCAGAAATGCCTGAGGATGTAAAGTGGAAGAGTAGTTTGTTTA AGGTGGATCCAAGAACCACAGGCTCAGACAAACTACTTTTGTATCATTTTGGGATCTGGAATTA AACGTGAGCCCCATTACCGGAAACAGCTTGGGCCCCAATCTCCTTGTTGGTGAAGAGAAGAGCC TGAGGACTGTTTTTTGACGTTTCCCGAGATTAAGGGATGCCTCAGTGAGGACTCGGCCATGTGA GTCCCTCTGCAGTCATATATGTCGTAACACGGGGACTGTGGGAACATTTTTGAGTTTCCTGAGG TCTAAAGGAACCTCTGGGCTGATTTGTGGAACAGAGCGCCTCCCCAGGCTTTCACAGGTGGTGA TCTTGTGCACTCAGCGCCATTTTGTCAGACGCCTCGAAGGGAGGTCGCCTCGCAATTACAGTTG AGAGTGATTGTCCAGTCCTAAACATCTGGTGACTTTGTGGATGCAGCACCATATTGTGAGACAG CTGGATTGTTGGTGGCCTCGCTGTGCCTTTCCAGTTGAGGAAGGTGAGCCTATCCACTGAAGGA TATCAGAGCAGCAGTTGGAGTATCAGAAAATTATCAGAAGAGGTGTCCAGCATTTGTAAGCAGT CTAGGTCTCAAGGAACTGAGATCCTGGGAAGGGGGAGTTTGACTGGAGATATCAGAGTGAATAT CTCAAGAGGGCAAGGACTGAAGGTCTGTGTCCTCCTTGTTCTGATTAGGACAGTATCCAGCCTG TCTGTACCAAGGAAAACCACAATGGATGATGCCCATAACATCCAATACAGCAACCTCCAAGACA ATGCTCAGGCCGAACAGGAGTTGGACAATGCCCAGGCTACCATGGCTGCAGCAGAGGAGGAAGA AGCCACCTCCACCTCAAAGGCCGAGTATGGTAGTGGAATACCAAGTCCTCTCCAGAGTCCTGAG AGAGCCTGCTCTCCCTCTGTGGCACTGGCCTCCATTCCTGTAGGCCCATCTGAGGAGGCTTCCA TCAGACAATTAGAGGCGCTGGAAGACCCACTCTATTTGTTGCACAATGCACAGAACGTAAAGGT GTATGATTTGGTGGACTTTCTGCTTTTCAAATATCAAACGAAGGCATTCACTACCAAAGCAGAA ATGCTGGAAACCATTGGTAGAGAGTATGATGAATATTATCCTCTGATCTTTAGTGAGGCCTCTG AGTGCATGAAGCTGGTCTTTGGCCTTGACATAGTAGAAGTGGACCCTTCTGTCCATTCCTATGT CCTTGTCACTGCCCTGGGCATCACCTATGATGGGATGCTGACTGATGTCCAGGGTATGCCCAAG ACAGGTGTCCTCATAGTTGTACTGGGTGTCATTTTTATGAAGGGAAACTATGTCAGTGAGGACA TTATCTGGGAAATGCTGAATAATATAGGGTTGTGTGGTGGGATGGATCCTTACATACATAGAGA CCCCAGGAAGCTCATCTCTGAGGAGTTTGTCCAGGAAGGGTACCTGGAATACAGACAGGTGCCT AACAGTGATCCTCCTAGCCATGTGTTCCTGTGGGGCCCAAGGGCCTTTGCAGAAACCACCAAAT TGAAAGTCTTGCAGTTTTTTGCTAGCATTACTAAGACTCATCCCAGAGCATACCCTGAAAAATA TGCAGAAGCTCTGAGAGATGAGATAGACAGGGTCGAGGCCTGGATCTTCAGCAGATGCTTCGAC ATCTCTGATCTGGGCACTGTCTAGTGCACTGGCAATTCATATCTAACATCAGGTCAGACAGAGT AGTCACTGATCCAGCTATTGTACCCTCAACTGGGAGCTGGTGGGAGGAGAGCATAAAGCTTTCT ATGTTTATTCTATTTGGGTGACTTTAGGATTCTTGGCATTTCAAAATGTTAATACTCTTATTAT AAGTTGCATTATGTTCAAGTTTAATCTTTTTGCAATGCATGCATTCTTGTTTTCCAGATTTGAA ACTGCATGAGGATGACTTCTGTCTGTCTTTGTAAAATGTCCCAACCTACTAGTACACTGAAATT GGAATTAAGTTGGTAATGGAAAAAATCTCAGCTTTAACTTGCAAAACAAGAATAAAATAAAAAT
hide sequence
|
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2022-06-10 |
Magea10-ps5 |
MAGE family member A10, pseudogene 5 |
RGD1566060 |
similar to Magea5 |
Symbol and Name Changed |
1299863 |
APPROVED |
2022-06-02 |
RGD1566060 |
similar to Magea5 |
ENSRNOG00000064790 |
|
Data merged from RGD:150345279 |
737654 |
PROVISIONAL |
2021-08-31 |
ENSRNOG00000064790 |
|
|
|
Symbol and Name status set to provisional |
45752 |
PROVISIONAL |
2008-04-30 |
RGD1566060 |
similar to Magea5 |
RGD1566060_predicted |
similar to Magea5 (predicted) |
'predicted' is removed |
2292626 |
APPROVED |
2006-03-07 |
RGD1566060_predicted |
similar to Magea5 (predicted) |
LOC302645 |
similar to Magea5 |
Symbol and Name status set to approved |
1299863 |
APPROVED |
2006-02-09 |
LOC302645 |
similar to Magea5 |
|
|
Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
|
|