N4bp2 (NEDD4 binding protein 2) - Rat Genome Database

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Gene: N4bp2 (NEDD4 binding protein 2) Rattus norvegicus
Analyze
Symbol: N4bp2
Name: NEDD4 binding protein 2
RGD ID: 1565738
Description: Predicted to enable ATP binding activity; ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; and DNA endonuclease activity. Predicted to be involved in DNA metabolic process. Predicted to be located in cytosol. Orthologous to human N4BP2 (NEDD4 binding protein 2); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC305342; NEDD4-binding protein 2; RGD1565738; similar to mKIAA1413 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81442,696,415 - 42,819,535 (-)NCBIGRCr8
mRatBN7.21442,342,690 - 42,479,861 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1442,409,510 - 42,483,960 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01443,963,353 - 44,092,844 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1444,038,614 - 44,078,897 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01443,782,882 - 43,908,753 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41445,096,756 - 45,142,700 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1441,560,669 - 41,632,706 (-)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (ISO)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11717310   PMID:12730195  


Genomics

Comparative Map Data
N4bp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81442,696,415 - 42,819,535 (-)NCBIGRCr8
mRatBN7.21442,342,690 - 42,479,861 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1442,409,510 - 42,483,960 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01443,963,353 - 44,092,844 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1444,038,614 - 44,078,897 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01443,782,882 - 43,908,753 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41445,096,756 - 45,142,700 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1441,560,669 - 41,632,706 (-)NCBICelera
Cytogenetic Map14p11NCBI
N4BP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38440,056,850 - 40,190,470 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl440,056,797 - 40,158,252 (+)EnsemblGRCh38hg38GRCh38
GRCh37440,058,470 - 40,159,872 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36439,775,242 - 39,833,423 (+)NCBINCBI36Build 36hg18NCBI36
Celera440,497,305 - 40,595,932 (+)NCBICelera
Cytogenetic Map4p14NCBI
HuRef439,381,945 - 39,483,119 (+)NCBIHuRef
CHM1_1440,057,424 - 40,159,070 (+)NCBICHM1_1
T2T-CHM13v2.0440,026,953 - 40,157,597 (+)NCBIT2T-CHM13v2.0
N4bp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39565,909,462 - 65,987,450 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl565,920,864 - 65,987,451 (+)EnsemblGRCm39 Ensembl
GRCm38565,760,510 - 65,830,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl565,763,521 - 65,830,108 (+)EnsemblGRCm38mm10GRCm38
MGSCv37566,154,760 - 66,218,023 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36566,042,656 - 66,105,919 (+)NCBIMGSCv36mm8
Celera563,056,171 - 63,121,053 (+)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map533.8NCBI
N4bp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554437,301,141 - 7,354,681 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554437,295,066 - 7,435,761 (-)NCBIChiLan1.0ChiLan1.0
N4BP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2340,243,048 - 40,355,355 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1440,428,265 - 40,547,334 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0434,380,215 - 34,482,797 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1440,253,199 - 40,336,040 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl440,253,199 - 40,336,040 (+)Ensemblpanpan1.1panPan2
N4BP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1372,323,016 - 72,439,593 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl372,277,190 - 72,439,615 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha374,866,346 - 74,988,131 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0373,084,841 - 73,207,383 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl373,090,114 - 73,207,308 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1372,353,404 - 72,475,357 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0372,503,885 - 72,625,754 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0372,889,208 - 73,011,634 (-)NCBIUU_Cfam_GSD_1.0
N4bp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528538,651,322 - 38,726,191 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364827,592,442 - 7,646,821 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364827,576,188 - 7,648,140 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
N4BP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl831,219,397 - 31,287,990 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1831,216,942 - 31,287,993 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2832,865,820 - 32,955,396 (+)NCBISscrofa10.2Sscrofa10.2susScr3
N4BP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12710,147,274 - 10,249,824 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2710,151,301 - 10,249,772 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604756,520,517 - 56,617,505 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
N4bp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476126,813,526 - 26,874,313 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476126,810,603 - 26,905,017 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in N4bp2
589 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:111
Count of miRNA genes:100
Interacting mature miRNAs:105
Transcripts:ENSRNOT00000031792
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat

Markers in Region
RH139230  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21442,435,082 - 42,435,231 (+)MAPPERmRatBN7.2
Rnor_6.01444,055,871 - 44,056,019NCBIRnor6.0
Rnor_5.01443,875,337 - 43,875,485UniSTSRnor5.0
RGSC_v3.41445,120,926 - 45,121,074UniSTSRGSC3.4
Celera1441,588,184 - 41,588,332UniSTS
Cytogenetic Map14p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 24 24 14 16 14 1 1 53 28 37 8 1
Low 3 18 33 27 3 27 7 9 21 7 4 3 7
Below cutoff 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_006221746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC091449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000031792   ⟹   ENSRNOP00000034526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1442,417,985 - 42,479,724 (-)Ensembl
Rnor_6.0 Ensembl1444,038,614 - 44,078,897 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000099507   ⟹   ENSRNOP00000088789
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1442,409,510 - 42,483,960 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112523   ⟹   ENSRNOP00000085430
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1442,409,510 - 42,479,724 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115840   ⟹   ENSRNOP00000086787
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1442,409,510 - 42,483,960 (-)Ensembl
RefSeq Acc Id: XM_017599459   ⟹   XP_017454948
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,819,533 (-)NCBI
mRatBN7.21442,407,351 - 42,465,705 (-)NCBI
Rnor_6.01444,028,024 - 44,085,417 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599463   ⟹   XP_017454952
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,810,767 (-)NCBI
mRatBN7.21442,407,351 - 42,457,059 (-)NCBI
Rnor_6.01444,028,024 - 44,076,712 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599465   ⟹   XP_017454954
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,810,766 (-)NCBI
mRatBN7.21442,407,351 - 42,457,055 (-)NCBI
Rnor_6.01444,028,024 - 44,076,711 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599466   ⟹   XP_017454955
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,819,535 (-)NCBI
mRatBN7.21442,407,351 - 42,465,725 (-)NCBI
Rnor_6.01444,028,024 - 44,085,411 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039092734   ⟹   XP_038948662
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,819,533 (-)NCBI
mRatBN7.21442,407,351 - 42,459,192 (-)NCBI
RefSeq Acc Id: XM_039092735   ⟹   XP_038948663
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,696,415 - 42,810,977 (-)NCBI
mRatBN7.21442,342,690 - 42,459,192 (-)NCBI
RefSeq Acc Id: XM_039092736   ⟹   XP_038948664
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,810,977 (-)NCBI
mRatBN7.21442,407,351 - 42,459,192 (-)NCBI
RefSeq Acc Id: XM_039092740   ⟹   XP_038948668
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,806,006 (-)NCBI
mRatBN7.21442,407,351 - 42,452,298 (-)NCBI
RefSeq Acc Id: XM_063273823   ⟹   XP_063129893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,810,723 (-)NCBI
RefSeq Acc Id: XM_063273824   ⟹   XP_063129894
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81442,761,289 - 42,810,766 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_017454948   ⟸   XM_017599459
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GHF3 (UniProtKB/TrEMBL),   A0A8I6A4H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454955   ⟸   XM_017599466
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A4H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454952   ⟸   XM_017599463
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A4H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454954   ⟸   XM_017599465
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A4H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000034526   ⟸   ENSRNOT00000031792
RefSeq Acc Id: XP_038948663   ⟸   XM_039092735
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GHF3 (UniProtKB/TrEMBL),   A0A8I6A4H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038948664   ⟸   XM_039092736
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GHF3 (UniProtKB/TrEMBL),   A0A8I6A4H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038948662   ⟸   XM_039092734
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GHF3 (UniProtKB/TrEMBL),   A0A8I6A4H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038948668   ⟸   XM_039092740
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000086787   ⟸   ENSRNOT00000115840
RefSeq Acc Id: ENSRNOP00000085430   ⟸   ENSRNOT00000112523
RefSeq Acc Id: ENSRNOP00000088789   ⟸   ENSRNOT00000099507
RefSeq Acc Id: XP_063129894   ⟸   XM_063273824
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063129893   ⟸   XM_063273823
- Peptide Label: isoform X2
Protein Domains
CUE   Smr

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZLS6-F1-model_v2 AlphaFold D3ZLS6 1-1649 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565738 AgrOrtholog
BioCyc Gene G2FUF-15754 BioCyc
Ensembl Genes ENSRNOG00000027152 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000031792.7 UniProtKB/TrEMBL
  ENSRNOT00000099507.1 UniProtKB/TrEMBL
  ENSRNOT00000112523.1 UniProtKB/TrEMBL
  ENSRNOT00000115840.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.110 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  DNA helicase RuvA subunit, C-terminal domain UniProtKB/TrEMBL
InterPro CUE UniProtKB/TrEMBL
  DUF1771 UniProtKB/TrEMBL
  N4BP2_CUE UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Smr_dom UniProtKB/TrEMBL
  Smr_dom_sf UniProtKB/TrEMBL
  UBA-like UniProtKB/TrEMBL
KEGG Report rno:305342 UniProtKB/TrEMBL
NCBI Gene 305342 ENTREZGENE
PANTHER NEDD4-BINDING PROTEIN 2 UniProtKB/TrEMBL
  NEDD4-BINDING PROTEIN 2 UniProtKB/TrEMBL
Pfam AAA_33 UniProtKB/TrEMBL
  DUF1771 UniProtKB/TrEMBL
  Smr UniProtKB/TrEMBL
PhenoGen N4bp2 PhenoGen
PROSITE CUE UniProtKB/TrEMBL
  SMR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000027152 RatGTEx
SMART DUF1771 UniProtKB/TrEMBL
  SMR UniProtKB/TrEMBL
Superfamily-SCOP SSF160443 UniProtKB/TrEMBL
  SSF46934 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A8I6A1M1_RAT UniProtKB/TrEMBL
  A0A8I6A4H4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GHF3 ENTREZGENE, UniProtKB/TrEMBL
  D3ZLS6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-07 N4bp2  NEDD4 binding protein 2  RGD1565738_predicted  similar to mKIAA1413 protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1565738_predicted  similar to mKIAA1413 protein (predicted)  LOC305342  similar to mKIAA1413 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC305342  similar to mKIAA1413 protein      Symbol and Name status set to provisional 70820 PROVISIONAL