Gene: Kdm5b (lysine demethylase 5B) Rattus norvegicus
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Symbol: Kdm5b
Name: lysine demethylase 5B
Description: ENCODES a protein that exhibits histone demethylase activity (H3-dimethyl-K4 specific) (ortholog); histone demethylase activity (H3-K4 specific) (ortholog); histone demethylase activity (H3-trimethyl-K4 specific) (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus; lens fiber cell differentiation; response to fungicide; PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); INTERACTS WITH bisphenol A; chlorpyrifos; diuron
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Jarid1b; jumonji, AT rich interactive domain 1B; jumonji, AT rich interactive domain 1B (Rbp2 like); Jumonji, AT rich interactive domain 1B (RBP2-like); LOC304809; lysine (K)-specific demethylase 5B; lysine-specific demethylase 5B; RGD1565602; similar to PLU1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01351,384,371 - 51,455,392 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01356,438,019 - 56,509,593 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41347,502,602 - 47,576,946 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1346,328,788 - 46,400,255 (+)NCBI
Cytogenetic Map13q13NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Kdm5b
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
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Vista + UCSC

RGD Object Information
RGD ID: 1565602
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2016-11-18
Status: ACTIVE