Tex29 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 16 | 84,352,574 - 84,366,273 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 77,650,471 - 77,664,171 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 77,650,473 - 77,664,116 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 82,930,937 - 82,944,579 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 86,383,582 - 86,397,224 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 81,626,290 - 81,639,932 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 82,985,834 - 83,000,928 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 82,985,835 - 82,999,827 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 82,458,364 - 82,472,373 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 82,500,674 - 82,514,319 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 16 | 75,452,334 - 75,465,960 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | q12.5 | NCBI | | | | |
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TEX29 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 13 | 111,316,185 - 111,344,248 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 13 | 111,316,184 - 111,344,249 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 13 | 111,968,532 - 111,996,595 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 13 | 110,771,016 - 110,794,595 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 13 | 92,819,927 - 92,845,111 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | q34 | NCBI | | | | | HuRef | 13 | 92,571,894 - 92,597,159 (+) | NCBI | | HuRef | | | CHM1_1 | 13 | 111,940,504 - 111,963,906 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 13 | 110,545,648 - 110,575,278 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tex29 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 8 | 11,890,488 - 11,905,761 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 11,890,474 - 11,905,761 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 11,840,487 - 11,855,761 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 11,840,474 - 11,855,761 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 11,840,521 - 11,855,761 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 11,840,493 - 11,855,733 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 12,015,588 - 12,030,534 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | A1.1 | NCBI | | | | | cM Map | 8 | 5.73 | NCBI | | | | |
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Tex29 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955404 | 1,405,904 - 1,745,715 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TEX29 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 14 | 112,811,095 - 112,833,317 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 13 | 111,490,727 - 111,512,810 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 13 | 92,446,990 - 92,473,521 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 13 | 111,558,979 - 111,580,699 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 13 | 111,559,001 - 111,580,699 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TEX29 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 22 | 59,309,452 - 59,326,308 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 22 | 59,313,874 - 59,325,494 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 22 | 59,019,207 - 59,036,050 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 22 | 59,932,372 - 59,949,211 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 22 | 59,932,559 - 59,949,248 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 22 | 59,433,925 - 59,450,749 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 22 | 59,426,878 - 59,443,709 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 22 | 59,461,621 - 59,478,482 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tex29 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 194,174,391 - 194,192,183 (+) | NCBI | | HiC_Itri_2 | | |
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TEX29 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 11 | 77,532,266 - 77,545,913 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 11 | 77,531,858 - 77,555,300 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 11 | 85,007,696 - 85,021,731 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
TEX29 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 3 | 89,479,853 - 89,502,535 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 3 | 89,480,641 - 89,502,410 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666046 | 46,250,751 - 46,273,759 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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