Gene: Patj (PATJ, crumbs cell polarity complex component) Rattus norvegicus
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Symbol: Patj
Name: PATJ, crumbs cell polarity complex component
Description: ASSOCIATED WITH Prostatic Neoplasms (ortholog); substance-related disorder (ortholog); Substance-Related Disorders (ortholog); FOUND IN protein complex; apical part of cell (ortholog); bicellular tight junction (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; amitriptyline; ammonium chloride
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: InaD-like 2; InaD-like 2 (Drosophila); inaD-like protein; Inadl; Inadl2; LOC313382; PDZ domain protein; PDZ domain protein (Drosophila inaD-like); RGD1565362; similar to channel-interacting pdz domain protein isoform 1
Orthologs:
Homo sapiens (human) : PATJ (PATJ, crumbs cell polarity complex component)  HGNC  AGR
Mus musculus (house mouse) : Patj (PATJ, crumbs cell polarity complex component)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Patj (PATJ, crumbs cell polarity complex component)
Pan paniscus (bonobo/pygmy chimpanzee) : PATJ (PATJ, crumbs cell polarity complex component)
Canis lupus familiaris (dog) : PATJ (PATJ, crumbs cell polarity complex component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Patj (PATJ, crumbs cell polarity complex component)
more info ...
Allele / Splice: PatjTn(sb-T2/Bart3)2.343Mcwi  
Genetic Models: F344-PatjTn(sb-T2/Bart3)2.343Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05117,038,548 - 117,340,308 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05120,981,525 - 121,281,044 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45118,806,744 - 119,131,114 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5111,633,199 - 111,931,738 (+)NCBICelera
Cytogenetic Map5q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Patj
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565362
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE