Amot (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 113,778,990 - 113,837,846 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 108,982,399 - 109,041,265 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 108,984,022 - 109,041,272 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | X | 116,751,231 - 116,810,238 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 116,751,230 - 116,792,864 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 116,890,173 - 116,949,168 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 33,018,434 - 33,062,515 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 108,364,426 - 108,423,279 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q34 | NCBI | | | | |
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AMOT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 112,774,877 - 112,840,831 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 112,774,503 - 112,840,831 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 112,018,105 - 112,084,059 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 111,904,761 - 111,970,699 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 111,823,875 - 111,890,188 | NCBI | | | | | Celera | X | 112,502,736 - 112,568,672 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q23 | NCBI | | | | | HuRef | X | 101,645,090 - 101,710,229 (-) | NCBI | | HuRef | | | CHM1_1 | X | 111,929,234 - 111,995,169 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 111,226,753 - 111,292,678 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Amot (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 144,229,420 - 144,288,145 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 144,229,421 - 144,288,177 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 145,446,424 - 145,505,966 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 145,446,425 - 145,505,181 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 141,880,967 - 141,921,589 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 140,696,313 - 140,733,414 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 129,393,202 - 129,433,781 (-) | NCBI | | Celera | | | Cytogenetic Map | X | F2 | NCBI | | | | | cM Map | X | 66.72 | NCBI | | | | |
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Amot (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955490 | 2,965,539 - 3,042,606 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955490 | 2,965,899 - 3,042,541 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AMOT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 112,282,271 - 112,348,879 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 112,285,879 - 112,351,911 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 101,907,032 - 101,973,052 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 112,362,633 - 112,428,216 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 112,362,633 - 112,428,216 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AMOT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 85,742,610 - 85,807,557 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 85,745,207 - 85,807,353 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 71,855,979 - 71,920,860 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 87,438,375 - 87,503,383 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 87,438,415 - 87,495,120 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 84,902,240 - 84,967,182 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 86,570,310 - 86,635,268 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 86,409,254 - 86,474,116 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Amot (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | X | 84,996,607 - 85,063,784 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936499 | 2,594,239 - 2,661,359 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936499 | 2,594,190 - 2,661,307 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AMOT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | X | 92,582,047 - 92,647,857 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 92,581,995 - 92,647,872 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 106,946,878 - 107,012,750 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AMOT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | X | 100,520,735 - 100,578,923 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 100,520,733 - 100,578,998 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666065 | 25,874,041 - 25,941,086 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Amot (Heterocephalus glaber - naked mole-rat) |
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