Gnpnat1 (glucosamine-phosphate N-acetyltransferase 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Gnpnat1 (glucosamine-phosphate N-acetyltransferase 1) Rattus norvegicus
Analyze
Symbol: Gnpnat1
Name: glucosamine-phosphate N-acetyltransferase 1
RGD ID: 1563144
Description: Enables glucosamine 6-phosphate N-acetyltransferase activity and monosaccharide binding activity. Involved in N-acetylglucosamine metabolic process; glucosamine metabolic process; and liver development. Predicted to be located in Golgi apparatus; endoplasmic reticulum-Golgi intermediate compartment; and late endosome. Orthologous to human GNPNAT1 (glucosamine-phosphate N-acetyltransferase 1); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: glucosamine 6-phosphate N-acetyltransferase; LOC498486; RGD1563144; similar to EMeg32 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81521,076,129 - 21,088,526 (-)NCBIGRCr8
mRatBN7.21518,596,180 - 18,608,854 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,596,442 - 18,608,739 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,391,243 - 21,403,537 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,348,201 - 22,360,495 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,604,775 - 20,617,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,721,292 - 19,734,032 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,721,293 - 19,733,967 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,685,448 - 23,698,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,272,165 - 21,284,459 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1519,024,815 - 19,037,109 (-)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. The cellular fate of glucose and its relevance in type 2 diabetes. Bouche C, etal., Endocr Rev. 2004 Oct;25(5):807-30.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Three forms of rat liver glucosamine 6-phosphate acetylase and the changes in their levels during development. Oikawa S and Akamatsu N, Int J Biochem. 1985;17(1):73-80.
4. Glucosamine 6-phosphate acetylase in rat ascites hepatomas. Oikawa S, etal., Int J Biochem. 1986;18(10):929-33.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:8889548   PMID:10777580   PMID:12477932   PMID:18675810   PMID:20439489   PMID:25416956  


Genomics

Comparative Map Data
Gnpnat1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81521,076,129 - 21,088,526 (-)NCBIGRCr8
mRatBN7.21518,596,180 - 18,608,854 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,596,442 - 18,608,739 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,391,243 - 21,403,537 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,348,201 - 22,360,495 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,604,775 - 20,617,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,721,292 - 19,734,032 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,721,293 - 19,733,967 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,685,448 - 23,698,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,272,165 - 21,284,459 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1519,024,815 - 19,037,109 (-)NCBICelera
Cytogenetic Map15p14NCBI
GNPNAT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,775,193 - 52,791,607 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1452,775,193 - 52,791,668 (-)EnsemblGRCh38hg38GRCh38
GRCh371453,241,911 - 53,258,325 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361452,311,661 - 52,328,133 (-)NCBINCBI36Build 36hg18NCBI36
Build 341452,311,661 - 52,328,133NCBI
Celera1433,291,588 - 33,308,063 (-)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1433,402,899 - 33,420,411 (-)NCBIHuRef
CHM1_11453,180,808 - 53,197,284 (-)NCBICHM1_1
T2T-CHM13v2.01446,982,987 - 46,999,449 (-)NCBIT2T-CHM13v2.0
Gnpnat1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,613,897 - 45,626,972 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,613,791 - 45,642,370 (-)EnsemblGRCm39 Ensembl
GRCm381445,376,421 - 45,388,987 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,376,334 - 45,404,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv371445,996,096 - 46,008,471 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361444,298,298 - 44,310,673 (-)NCBIMGSCv36mm8
Celera1441,556,350 - 41,568,784 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.92NCBI
Gnpnat1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,406,723 - 10,424,431 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,406,248 - 10,424,431 (+)NCBIChiLan1.0ChiLan1.0
GNPNAT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21553,906,123 - 53,922,628 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11453,122,633 - 53,139,135 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01433,371,603 - 33,388,098 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11451,655,182 - 51,671,617 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,655,182 - 51,671,619 (-)Ensemblpanpan1.1panPan2
GNPNAT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1828,992,173 - 29,005,511 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl828,993,227 - 29,005,435 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha828,736,462 - 28,749,813 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0829,158,602 - 29,171,970 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl829,158,609 - 29,171,982 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1828,832,502 - 28,845,853 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0828,904,894 - 28,918,244 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0829,233,507 - 29,247,101 (-)NCBIUU_Cfam_GSD_1.0
Gnpnat1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,301,693 - 76,312,369 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366972,079,470 - 2,086,877 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366972,079,396 - 2,087,602 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNPNAT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,407,229 - 182,423,441 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,404,460 - 182,423,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,680,394 - 202,694,010 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GNPNAT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,862,903 - 29,878,050 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,863,956 - 29,878,135 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605318,134,030 - 18,149,747 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gnpnat1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,334,344 - 16,346,107 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,334,347 - 16,346,107 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gnpnat1
115 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:276
Count of miRNA genes:171
Interacting mature miRNAs:195
Transcripts:ENSRNOT00000012036
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)colorectal tumor number (CMO:0001794)15226636822711984Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
5685002Bss103Bone structure and strength QTL 1032.8tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)151448116528469888Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat

Markers in Region
D15Got25  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,613,974 - 18,614,158 (+)MAPPERmRatBN7.2
Rnor_6.01519,739,203 - 19,739,386NCBIRnor6.0
Rnor_5.01523,703,359 - 23,703,542UniSTSRnor5.0
RGSC_v3.41521,289,694 - 21,289,878RGDRGSC3.4
RGSC_v3.41521,289,695 - 21,289,878UniSTSRGSC3.4
RGSC_v3.11521,289,695 - 21,289,878RGD
Celera1519,042,360 - 19,042,543UniSTS
RH 3.4 Map15153.4UniSTS
RH 3.4 Map15153.4RGD
RH 2.0 Map15103.3RGD
Cytogenetic Map15p14UniSTS
AA960555  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,683,058 - 18,683,155 (+)MAPPERmRatBN7.2
Rnor_6.01519,807,938 - 19,808,034NCBIRnor6.0
Rnor_5.01523,771,948 - 23,772,044UniSTSRnor5.0
RGSC_v3.41521,358,543 - 21,358,639UniSTSRGSC3.4
Celera1519,110,421 - 19,110,517UniSTS
Cytogenetic Map15p14UniSTS
RH131692  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,596,635 - 18,596,816 (+)MAPPERmRatBN7.2
Rnor_6.01519,721,483 - 19,721,663NCBIRnor6.0
Rnor_5.01523,685,639 - 23,685,819UniSTSRnor5.0
RGSC_v3.41521,272,356 - 21,272,536UniSTSRGSC3.4
Celera1519,025,006 - 19,025,186UniSTS
RH 3.4 Map15150.0UniSTS
Cytogenetic Map15p14UniSTS
RH134534  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,683,035 - 18,683,246 (+)MAPPERmRatBN7.2
Rnor_6.01519,807,915 - 19,808,125NCBIRnor6.0
Rnor_5.01523,771,925 - 23,772,135UniSTSRnor5.0
RGSC_v3.41521,358,520 - 21,358,730UniSTSRGSC3.4
Celera1519,110,398 - 19,110,608UniSTS
RH 3.4 Map15149.4UniSTS
Cytogenetic Map15p14UniSTS
RH140108  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,596,241 - 18,596,411 (+)MAPPERmRatBN7.2
Rnor_6.01519,721,089 - 19,721,258NCBIRnor6.0
Rnor_5.01523,685,245 - 23,685,414UniSTSRnor5.0
RGSC_v3.41521,271,962 - 21,272,131UniSTSRGSC3.4
Celera1519,024,612 - 19,024,781UniSTS
RH 3.4 Map15158.7UniSTS
Cytogenetic Map15p14UniSTS
AI179101  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,683,992 - 18,684,087 (+)MAPPERmRatBN7.2
Rnor_6.01519,808,872 - 19,808,966NCBIRnor6.0
Rnor_5.01523,772,882 - 23,772,976UniSTSRnor5.0
RGSC_v3.41521,359,477 - 21,359,571UniSTSRGSC3.4
Celera1519,111,355 - 19,111,449UniSTS
RH 3.4 Map15156.3UniSTS
Cytogenetic Map15p14UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 26 57 41 19 41 3 3 74 35 40 11 3
Low 17 5 8 1 5
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000012036   ⟹   ENSRNOP00000012036
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1518,596,442 - 18,608,737 (-)Ensembl
Rnor_6.0 Ensembl1519,721,293 - 19,733,967 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000078850   ⟹   ENSRNOP00000071110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1518,596,465 - 18,604,682 (-)Ensembl
Rnor_6.0 Ensembl1519,721,293 - 19,729,598 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115628   ⟹   ENSRNOP00000093866
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1518,597,451 - 18,608,739 (-)Ensembl
RefSeq Acc Id: NM_001134756   ⟹   NP_001128228
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81521,076,129 - 21,088,423 (-)NCBI
mRatBN7.21518,596,445 - 18,608,739 (-)NCBI
Rnor_6.01519,721,292 - 19,733,586 (-)NCBI
Rnor_5.01523,685,448 - 23,698,244 (-)NCBI
RGSC_v3.41521,272,165 - 21,284,459 (-)RGD
Celera1519,024,815 - 19,037,109 (-)RGD
Sequence:
RefSeq Acc Id: NM_001134757   ⟹   NP_001128229
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81521,076,129 - 21,084,435 (-)NCBI
mRatBN7.21518,596,445 - 18,604,751 (-)NCBI
Rnor_6.01519,721,292 - 19,729,598 (-)NCBI
Rnor_5.01523,685,448 - 23,698,244 (-)NCBI
RGSC_v3.41521,272,165 - 21,284,459 (-)RGD
Celera1519,024,815 - 19,033,121 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006251784   ⟹   XP_006251846
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81521,076,129 - 21,088,526 (-)NCBI
mRatBN7.21518,596,180 - 18,608,854 (-)NCBI
Rnor_6.01519,721,292 - 19,733,998 (-)NCBI
Rnor_5.01523,685,448 - 23,698,244 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063274546   ⟹   XP_063130616
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81521,076,129 - 21,084,324 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001128228   ⟸   NM_001134756
- UniProtKB: B1H249 (UniProtKB/TrEMBL),   A6KDZ8 (UniProtKB/TrEMBL),   A0A8I6AKF3 (UniProtKB/TrEMBL),   F7EV78 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001128229   ⟸   NM_001134757
- UniProtKB: B1H249 (UniProtKB/TrEMBL),   A6KDZ8 (UniProtKB/TrEMBL),   A0A8I6AKF3 (UniProtKB/TrEMBL),   F7EV78 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006251846   ⟸   XM_006251784
- Peptide Label: isoform X1
- UniProtKB: B1H249 (UniProtKB/TrEMBL),   A6KDZ8 (UniProtKB/TrEMBL),   A0A8I6AKF3 (UniProtKB/TrEMBL),   F7EV78 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000012036   ⟸   ENSRNOT00000012036
RefSeq Acc Id: ENSRNOP00000071110   ⟸   ENSRNOT00000078850
RefSeq Acc Id: ENSRNOP00000093866   ⟸   ENSRNOT00000115628
RefSeq Acc Id: XP_063130616   ⟸   XM_063274546
- Peptide Label: isoform X2
Protein Domains
N-acetyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B1H249-F1-model_v2 AlphaFold B1H249 1-184 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699605
Promoter ID:EPDNEW_R10121
Type:multiple initiation site
Name:Gnpnat1_1
Description:glucosamine-phosphate N-acetyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01519,733,935 - 19,733,995EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563144 AgrOrtholog
BioCyc Gene G2FUF-14218 BioCyc
BioCyc Pathway UDPNACETYLGALSYN-PWY [UDP-N-acetyl-D-glucosamine biosynthesis II] BioCyc
BioCyc Pathway Image UDPNACETYLGALSYN-PWY BioCyc
Ensembl Genes ENSRNOG00000008641 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000012036 ENTREZGENE
  ENSRNOT00000012036.7 UniProtKB/TrEMBL
  ENSRNOT00000078850.2 UniProtKB/TrEMBL
  ENSRNOT00000115628.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7322586 IMAGE-MGC_LOAD
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GCN5-rel_AcTrfase UniProtKB/TrEMBL
  GNPNAT1 UniProtKB/TrEMBL
KEGG Report rno:498486 UniProtKB/TrEMBL
MGC_CLONE MGC:188219 IMAGE-MGC_LOAD
NCBI Gene 498486 ENTREZGENE
PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE UniProtKB/TrEMBL
  PTHR13355 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PhenoGen Gnpnat1 PhenoGen
PROSITE GNAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008641 RatGTEx
Superfamily-SCOP Acyl_CoA_acyltransferase UniProtKB/TrEMBL
UniProt A0A0G2JZM9_RAT UniProtKB/TrEMBL
  A0A8I6AKF3 ENTREZGENE, UniProtKB/TrEMBL
  A6KDZ8 ENTREZGENE, UniProtKB/TrEMBL
  B1H249 ENTREZGENE
  F7EV78 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary B1H249 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-06 Gnpnat1  glucosamine-phosphate N-acetyltransferase 1  RGD1563144_predicted  similar to EMeg32 protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1563144_predicted  similar to EMeg32 protein (predicted)  LOC498486  similar to EMeg32 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498486  similar to EMeg32 protein      Symbol and Name status set to provisional 70820 PROVISIONAL