Haus7 (HAUS augmin-like complex, subunit 7)

Gene: Haus7 (HAUS augmin-like complex, subunit 7) Rattus norvegicus

Analyze

Symbol:

Haus7

Name:

HAUS augmin-like complex, subunit 7

RGD ID:

1562991

Description:

Predicted to enable microtubule minus-end binding activity and thioesterase binding activity. Predicted to be involved in centrosome cycle and spindle assembly. Predicted to be located in microtubule cytoskeleton; nucleolus; and plasma membrane. Predicted to be part of HAUS complex. Orthologous to human HAUS7 (HAUS augmin like complex subunit 7); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

HAUS augmin-like complex subunit 7; LOC293844; RGD1562991; similar to UCH37-interacting protein 1; UCHL5 interacting protein; Uchl5ip

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	156,306,320 - 156,331,940 (-)	NCBI		GRCr8
mRatBN7.2	X	151,154,979 - 151,174,441 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	151,154,979 - 151,180,577 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	153,296,141 - 153,315,224 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	156,859,352 - 156,878,435 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	154,531,185 - 154,550,268 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	157,347,222 - 157,372,796 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	157,353,577 - 157,372,809 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	153,095,311 - 153,120,880 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	159,337,591 - 159,356,655 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	136,715,537 - 136,734,620 (+)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adrenoleukodystrophy (ISO)

autistic disorder (ISO)

Barth syndrome (ISO)

cerebral creatine deficiency syndrome 1 (ISO)

dyskeratosis congenita (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

favism (ISO)

genetic disease (ISO)

immunodeficiency 33 (ISO)

paraplegia (ISO)

periventricular nodular heterotopia (ISO)

Splenomegaly (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

chromium(6+) (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dibutyl phthalate (EXP,ISO)

enzyme inhibitor (ISO)

methapyrilene (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

troglitazone (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

centrosome cycle (IBA,ISO)

spindle assembly (IBA,ISO)

Cellular Component

centrosome (ISO)

HAUS complex (IBA,ISO)

mitotic spindle microtubule (ISO)

nucleolus (IEA,ISO)

plasma membrane (IEA,ISO)

Molecular Function

microtubule minus-end binding (IBA)

protein binding (ISO)

thioesterase binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11163772	PMID:12477932	PMID:19369198	PMID:19427217	PMID:21399614

Genomics

Comparative Map Data

Haus7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	156,306,320 - 156,331,940 (-)	NCBI		GRCr8
mRatBN7.2	X	151,154,979 - 151,174,441 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	151,154,979 - 151,180,577 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	153,296,141 - 153,315,224 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	156,859,352 - 156,878,435 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	154,531,185 - 154,550,268 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	157,347,222 - 157,372,796 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	157,353,577 - 157,372,809 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	153,095,311 - 153,120,880 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	159,337,591 - 159,356,655 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	136,715,537 - 136,734,620 (+)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

HAUS7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	153,447,668 - 153,495,465 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	153,447,668 - 153,495,516 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	152,713,126 - 152,760,923 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	152,366,318 - 152,389,283 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	152,946,833 - 152,970,312 (-)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	141,372,261 - 141,419,460 (-)	NCBI		HuRef
CHM1_1	X	152,587,548 - 152,635,492 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	151,721,251 - 151,769,038 (-)	NCBI		T2T-CHM13v2.0

Haus7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	72,480,921 - 72,502,635 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	72,480,921 - 72,502,650 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	73,437,315 - 73,459,029 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	73,437,315 - 73,459,044 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	70,682,654 - 70,704,368 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	69,690,035 - 69,711,749 (-)	NCBI		MGSCv36	mm8
Celera	X	64,691,155 - 64,712,939 (-)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	37.32	NCBI

Haus7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955580	210,820 - 230,734 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955580	210,799 - 230,450 (-)	NCBI	ChiLan1.0	ChiLan1.0

HAUS7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	153,484,903 - 153,524,280 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	153,488,507 - 153,514,688 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	142,998,240 - 143,032,602 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	152,884,656 - 152,907,620 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	152,881,714 - 152,907,620 (-)	Ensembl	panpan1.1		panPan2

HAUS7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	121,264,824 - 121,296,712 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	121,266,584 - 121,297,076 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	106,597,285 - 106,627,487 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	123,524,855 - 123,550,859 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	X	120,178,899 - 120,209,102 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	122,694,013 - 122,724,221 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	122,456,069 - 122,486,247 (-)	NCBI		UU_Cfam_GSD_1.0

Haus7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	118,584,145 - 118,612,356 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936809	321,497 - 350,110 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936809	321,906 - 350,105 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HAUS7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	124,234,736 - 124,258,098 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	124,234,735 - 124,258,133 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	141,801,317 - 141,821,536 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HAUS7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	127,882,121 - 127,930,089 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	127,878,900 - 127,902,344 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	65,743,859 - 65,788,401 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Haus7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624946	190,127 - 210,497 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624946	190,065 - 210,003 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Haus7
2 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	353
Count of miRNA genes:	202
Interacting mature miRNAs:	230
Transcripts:	ENSRNOT00000046264
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10059603	Bw174	Body weight QTL 174	3.4	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	X	113937816	152453651	Rat
634346	Insul4	Insulin level QTL 4	0		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	X	126975089	152453651	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	26	33	20	10	20	1	1	68	35	41	6	1
Low		17	24	21	9	21	7	10	6			5	7
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001277272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010061174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC103640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000080691 ⟹ ENSRNOP00000074313

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	151,154,984 - 151,174,045 (-)	Ensembl
Rnor_6.0 Ensembl	X	157,353,730 - 157,372,791 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000090596 ⟹ ENSRNOP00000070747

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	151,154,979 - 151,180,577 (-)	Ensembl
Rnor_6.0 Ensembl	X	157,353,577 - 157,372,809 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000115770 ⟹ ENSRNOP00000088411

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	151,154,979 - 151,180,574 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000117891 ⟹ ENSRNOP00000079527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	151,154,982 - 151,180,574 (-)	Ensembl

RefSeq Acc Id:

NM_001277272 ⟹ NP_001264201

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	156,306,320 - 156,325,403 (-)	NCBI
mRatBN7.2	X	151,154,979 - 151,174,062 (-)	NCBI
Rnor_6.0	X	157,353,713 - 157,372,796 (+)	NCBI
Rnor_5.0	1	153,095,311 - 153,120,880 (+)	NCBI
Celera	1	136,715,537 - 136,734,620 (+)	NCBI

Sequence:

show sequence

CTGGTGAACCTTTAGCAGTGCGGCAGGAGCCTGTAAGCTTGGGGGCGTGAACCATTTTCGGTTC
AGAGCGCGAAACATGGCGGAGAAGGGTGCTGGTGGCGGTGCTGGTGGCGGTTCTGATGACAGCT
ACTACGAAGATGTGGGTGATGACTGCGTGGTCAAGGCGGCTGTGGAGGTGTTCGAGAAGCTAAA
GGGTATTAGCTGCCCCTTCCTCGATGGTCTGTATATTACAGAACCAAAGACAATTATGGAACTG
CTGTGTAGGCCCTCAAAGTACCGGTTGGACATACTGGAATGGATGTGTATACGGGTCTGTCCTT
CCTTGCAAGACAAGTTCAGCTTGCTGAAAGGAAATGCAGTGGATATGAAGATACAGGAGATGGT
GAAGCTAGGTCATGACCTGATGTTGTGTGCGCCAGATGACCAGGATCTTCTAATGGGCCGTGAG
TGTCCCCAGAAGCAACTACAGTTCATGGACAAGTTACTGGATATGATGCAGAGCCTGGCCACTG
GATGCTCCAGTAGTTCTAGCCTGAAGGAACACCTTGAAGGTGCCACAGAGAAGAATGACGCCTT
GCTTGGGGAGCTGTTCTCCAGCCCCAACCTGTGGGCAATTTTGAAACCCGAGAGTGACCCATGG
CCCCTGGACATGCAGTCCTCTCTCAACAAGCAATGTGATGACCTGCCAAAGGCTGGCCCCTCTG
CCCAGTCAGAGGGAGAGAAGGTGGCAGATTTGGCCAGGCAGCTACAGGAGAGTGCTACTAAGCT
TCAGACACTCCGAGACCAGTGCTTTGCACAGCATAAAGCAGGGACTGACACCAGCACCGTAGAC
CAGAAACTCCGTCTGGTCATTTCTGACTTCTACCAGCTCATCTTGGCCTTCCTGCAAGTCTATG
ATGATGAGCTAGGCGAGTGCTGCCAGCGCCCAGTACCCAGCCTGCACCCAAGTGGTCCCATCAT
CCAAGCTGTCTATCAGACTCTGGCTTCCTGTGGCCAATTGTTGAAAGCAGTCATGGAGATTGCA
GACACCTCTGCTGAAGCTATGGAAGCAGCAAGGAAGCAGGAAGGAGAGCCGAACTGTTGGAGCA
GCAACAACTCTGGGATAAGCCTGGCTGCCAGGATTGATGAAGTAACACAGAAGTACAAGATCCT
CACTGACAGATTTCACAGAGGCACAAGATAATGGAGGGGGCATTAAGCCTTCCCTGGAGATGTC
AGGAGGGGCAGTTCCAGTCCTGTTCATAACCTGCCTGGATTTCTACTTGCCTGATGCTTGCAGT
TTGAAGGGAAGGAGGGAGAGGGAGGTAGAGAAGGAAGGCAGAGATGAGTAGGACAGGGAAAGTA
AAAATAAAACTCATGCTCAGAGA

hide sequence

RefSeq Acc Id:

XM_039099522 ⟹ XP_038955450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	156,306,322 - 156,331,937 (-)	NCBI
mRatBN7.2	X	151,154,981 - 151,174,441 (-)	NCBI

RefSeq Acc Id:

XM_063279832 ⟹ XP_063135902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	156,306,322 - 156,331,937 (-)	NCBI

RefSeq Acc Id:

XM_063279833 ⟹ XP_063135903

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	156,316,987 - 156,331,940 (-)	NCBI

RefSeq Acc Id:

XM_063279834 ⟹ XP_063135904

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	156,317,222 - 156,331,940 (-)	NCBI

RefSeq Acc Id:

XR_010061174

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	156,317,069 - 156,331,940 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001264201	(Get FASTA)	NCBI Sequence Viewer
	XP_038955450	(Get FASTA)	NCBI Sequence Viewer
	XP_063135902	(Get FASTA)	NCBI Sequence Viewer
	XP_063135903	(Get FASTA)	NCBI Sequence Viewer
	XP_063135904	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI03641	(Get FASTA)	NCBI Sequence Viewer
	AAI58689	(Get FASTA)	NCBI Sequence Viewer
	EDL85049	(Get FASTA)	NCBI Sequence Viewer
	EDL85050	(Get FASTA)	NCBI Sequence Viewer
	EDL85051	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070747
	ENSRNOP00000070747.2
	ENSRNOP00000074313.1
	ENSRNOP00000079527.1
	ENSRNOP00000088411.1

RefSeq Acc Id:

NP_001264201 ⟸ NM_001277272

- UniProtKB:

B0BN53 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEKGAGGGAGGGSDDSYYEDVGDDCVVKAAVEVFEKLKGISCPFLDGLYITEPKTIMELLCRP
SKYRLDILEWMCIRVCPSLQDKFSLLKGNAVDMKIQEMVKLGHDLMLCAPDDQDLLMGRECPQK
QLQFMDKLLDMMQSLATGCSSSSSLKEHLEGATEKNDALLGELFSSPNLWAILKPESDPWPLDM
QSSLNKQCDDLPKAGPSAQSEGEKVADLARQLQESATKLQTLRDQCFAQHKAGTDTSTVDQKLR
LVISDFYQLILAFLQVYDDELGECCQRPVPSLHPSGPIIQAVYQTLASCGQLLKAVMEIADTSA
EAMEAARKQEGEPNCWSSNNSGISLAARIDEVTQKYKILTDRFHRGTR

hide sequence

RefSeq Acc Id:

ENSRNOP00000074313 ⟸ ENSRNOT00000080691

RefSeq Acc Id:

ENSRNOP00000070747 ⟸ ENSRNOT00000090596

RefSeq Acc Id:	XP_038955450 ⟸ XM_039099522
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JYQ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000088411 ⟸ ENSRNOT00000115770

RefSeq Acc Id:

ENSRNOP00000079527 ⟸ ENSRNOT00000117891

RefSeq Acc Id:	XP_063135902 ⟸ XM_063279832
- Peptide Label:	isoform X2
- UniProtKB:	B0BN53 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135903 ⟸ XM_063279833
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063135904 ⟸ XM_063279834
- Peptide Label:	isoform X4

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B0BN53-F1-model_v2	AlphaFold	B0BN53	1-368	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13702065

Promoter ID:

EPDNEW_R12584

Type:

initiation region

Name:

Haus7_1

Description:

HAUS augmin-like complex, subunit 7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	157,353,777 - 157,353,837	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562991	AgrOrtholog
BioCyc Gene	G2FUF-675	BioCyc
Ensembl Genes	ENSRNOG00000055648	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000080691.2	UniProtKB/TrEMBL
	ENSRNOT00000090596.2	UniProtKB/TrEMBL
	ENSRNOT00000115770.1	UniProtKB/TrEMBL
	ENSRNOT00000117891.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7134953	IMAGE-MGC_LOAD
	IMAGE:8375819	IMAGE-MGC_LOAD
InterPro	Haus7-like	UniProtKB/TrEMBL
KEGG Report	rno:293844	UniProtKB/TrEMBL
MGC_CLONE	MGC:125119	IMAGE-MGC_LOAD
	MGC:187705	IMAGE-MGC_LOAD
NCBI Gene	293844	ENTREZGENE
PANTHER	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7	UniProtKB/TrEMBL
	PTHR14352	UniProtKB/TrEMBL
PhenoGen	Haus7	PhenoGen
RatGTEx	ENSRNOG00000055648	RatGTEx
UniProt	A0A0G2JYQ1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A6G6_RAT	UniProtKB/TrEMBL
	A0A8I6G3F4_RAT	UniProtKB/TrEMBL
	B0BN53	ENTREZGENE, UniProtKB/TrEMBL
	Q3ZAU9_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-05-05	Haus7	HAUS augmin-like complex, subunit 7	Uchl5ip	UCHL5 interacting protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-06	Uchl5ip	UCHL5 interacting protein	RGD1562991_predicted	similar to UCH37-interacting protein 1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1562991_predicted	similar to UCH37-interacting protein 1 (predicted)	LOC293844	similar to UCH37-interacting protein 1	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC293844	similar to UCH37-interacting protein 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar