Dgkh (diacylglycerol kinase, eta) - Rat Genome Database

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Gene: Dgkh (diacylglycerol kinase, eta) Rattus norvegicus
Analyze
Symbol: Dgkh
Name: diacylglycerol kinase, eta
RGD ID: 1561955
Description: Predicted to enable several functions, including ATP-dependent diacylglycerol kinase activity; SAM domain binding activity; and identical protein binding activity. Predicted to be involved in several processes, including glycerolipid metabolic process; lipid phosphorylation; and protein kinase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in actin cytoskeleton; endosome; and plasma membrane. Predicted to be part of protein-containing complex. Orthologous to human DGKH (diacylglycerol kinase eta); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: diacylglycerol kinase eta; LOC361076; RGD1561955; similar to diacylglycerol kinase eta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81560,390,279 - 60,559,777 (-)NCBIGRCr8
mRatBN7.21553,981,079 - 54,150,470 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1553,991,481 - 54,150,706 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01560,791,574 - 60,967,236 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1560,803,098 - 60,959,769 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01564,459,551 - 64,632,872 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41559,730,745 - 59,883,806 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1553,571,809 - 53,733,828 (-)NCBICelera
Cytogenetic Map15q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12810723   PMID:23949095  


Genomics

Comparative Map Data
Dgkh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81560,390,279 - 60,559,777 (-)NCBIGRCr8
mRatBN7.21553,981,079 - 54,150,470 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1553,991,481 - 54,150,706 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01560,791,574 - 60,967,236 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1560,803,098 - 60,959,769 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01564,459,551 - 64,632,872 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41559,730,745 - 59,883,806 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1553,571,809 - 53,733,828 (-)NCBICelera
Cytogenetic Map15q11NCBI
DGKH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381342,040,070 - 42,256,584 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1342,040,036 - 42,256,578 (+)EnsemblGRCh38hg38GRCh38
GRCh371342,614,206 - 42,830,720 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361341,520,889 - 41,701,888 (+)NCBINCBI36Build 36hg18NCBI36
Build 341341,520,888 - 41,701,888NCBI
Celera1323,680,569 - 23,861,291 (+)NCBICelera
Cytogenetic Map13q14.11NCBI
HuRef1323,417,019 - 23,607,148 (+)NCBIHuRef
CHM1_11342,581,819 - 42,771,353 (+)NCBICHM1_1
T2T-CHM13v2.01341,259,613 - 41,476,312 (+)NCBIT2T-CHM13v2.0
Dgkh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391478,796,789 - 78,970,169 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1478,796,190 - 78,970,216 (-)EnsemblGRCm39 Ensembl
GRCm381478,559,349 - 78,732,729 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1478,558,750 - 78,732,776 (-)EnsemblGRCm38mm10GRCm38
MGSCv371478,969,416 - 79,124,896 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361477,303,764 - 77,459,244 (-)NCBIMGSCv36mm8
Celera1476,080,068 - 76,239,844 (-)NCBICelera
Cytogenetic Map14D3NCBI
cM Map1441.56NCBI
Dgkh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555184,113,265 - 4,208,449 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555184,104,700 - 4,263,657 (-)NCBIChiLan1.0ChiLan1.0
DGKH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21441,536,460 - 41,740,387 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11332,640,161 - 32,838,627 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01323,221,391 - 23,413,541 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11341,815,404 - 41,817,107 (+)NCBIpanpan1.1PanPan1.1panPan2
DGKH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1228,530,993 - 8,637,535 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl228,543,708 - 8,756,878 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha228,523,080 - 8,701,994 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0228,754,811 - 8,933,765 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl228,763,916 - 8,982,836 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1228,447,526 - 8,626,622 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0228,498,140 - 8,677,013 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0228,509,830 - 8,688,747 (-)NCBIUU_Cfam_GSD_1.0
Dgkh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945152,343,342 - 152,517,373 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367471,563,323 - 1,728,767 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367471,562,173 - 1,728,588 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DGKH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1124,784,429 - 24,964,548 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11124,772,396 - 24,970,928 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21125,479,287 - 25,673,052 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DGKH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1320,224,255 - 20,408,493 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl320,233,249 - 20,407,927 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605723,788,975 - 23,987,306 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dgkh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474812,862,946 - 13,065,484 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474812,850,476 - 13,065,504 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dgkh
1257 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:134
Count of miRNA genes:99
Interacting mature miRNAs:105
Transcripts:ENSRNOT00000044063, ENSRNOT00000058079
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153361105871477291Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153361105871477291Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
724545Niddm54Non-insulin dependent diabetes mellitus QTL 540.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)155079449473699215Rat
2317050Aia24Adjuvant induced arthritis QTL 242.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)155284790873690657Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)155380615298806152Rat

Markers in Region
D15Got66  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21554,019,403 - 54,019,579 (+)MAPPERmRatBN7.2
Rnor_6.01560,829,298 - 60,829,473NCBIRnor6.0
Rnor_5.01564,497,271 - 64,497,446UniSTSRnor5.0
RGSC_v3.41559,757,080 - 59,757,255RGDRGSC3.4
RGSC_v3.41559,757,081 - 59,757,256UniSTSRGSC3.4
RGSC_v3.11559,772,860 - 59,773,035RGD
Celera1553,610,156 - 53,610,331UniSTS
RH 3.4 Map15481.5RGD
RH 3.4 Map15481.5UniSTS
Cytogenetic Map15q11UniSTS
BE110031  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21553,992,082 - 53,992,291 (+)MAPPERmRatBN7.2
Rnor_6.01560,802,578 - 60,802,786NCBIRnor6.0
Rnor_5.01564,470,551 - 64,470,759UniSTSRnor5.0
RGSC_v3.41559,730,026 - 59,730,234UniSTSRGSC3.4
Celera1553,582,813 - 53,583,021UniSTS
RH 3.4 Map15473.8UniSTS
Cytogenetic Map15q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 4 6 10 2 11 8
Low 3 43 38 26 13 26 8 8 64 33 30 3 8
Below cutoff 14 14 14 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001072779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003752832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide FQ228184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000058079   ⟹   ENSRNOP00000054887
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1553,992,802 - 54,150,706 (-)Ensembl
Rnor_6.0 Ensembl1560,803,098 - 60,959,769 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000097320   ⟹   ENSRNOP00000077411
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1553,991,836 - 54,150,706 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000100616   ⟹   ENSRNOP00000089877
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1553,991,481 - 54,143,587 (-)Ensembl
RefSeq Acc Id: NM_001427603   ⟹   NP_001414532
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,279 - 60,559,777 (-)NCBI
RefSeq Acc Id: XM_006252363   ⟹   XP_006252425
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,480,756 (-)NCBI
mRatBN7.21553,981,079 - 54,071,569 (-)NCBI
Rnor_6.01560,791,574 - 60,885,898 (-)NCBI
Rnor_5.01564,459,551 - 64,632,872 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008770920   ⟹   XP_008769142
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,484,364 (-)NCBI
mRatBN7.21553,981,079 - 54,074,192 (-)NCBI
Rnor_6.01560,791,574 - 60,892,286 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039094035   ⟹   XP_038949963
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,559,653 (-)NCBI
mRatBN7.21553,981,079 - 54,150,470 (-)NCBI
RefSeq Acc Id: XM_039094036   ⟹   XP_038949964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,559,759 (-)NCBI
mRatBN7.21553,981,079 - 54,150,470 (-)NCBI
RefSeq Acc Id: XM_039094038   ⟹   XP_038949966
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,480,756 (-)NCBI
mRatBN7.21553,981,079 - 54,068,299 (-)NCBI
RefSeq Acc Id: XM_063274439   ⟹   XP_063130509
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,559,653 (-)NCBI
RefSeq Acc Id: XM_063274440   ⟹   XP_063130510
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,463,942 (-)NCBI
RefSeq Acc Id: XM_063274441   ⟹   XP_063130511
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,463,002 (-)NCBI
RefSeq Acc Id: XM_063274442   ⟹   XP_063130512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81560,390,283 - 60,461,672 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_006252425   ⟸   XM_006252363
- Peptide Label: isoform X4
- UniProtKB: D3ZSZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008769142   ⟸   XM_008770920
- Peptide Label: isoform X4
- UniProtKB: D3ZSZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000054887   ⟸   ENSRNOT00000058079
RefSeq Acc Id: XP_038949963   ⟸   XM_039094035
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038949964   ⟸   XM_039094036
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038949966   ⟸   XM_039094038
- Peptide Label: isoform X4
- UniProtKB: D3ZSZ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000077411   ⟸   ENSRNOT00000097320
RefSeq Acc Id: ENSRNOP00000089877   ⟸   ENSRNOT00000100616
RefSeq Acc Id: NP_001414532   ⟸   NM_001427603
RefSeq Acc Id: XP_063130509   ⟸   XM_063274439
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063130510   ⟸   XM_063274440
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063130511   ⟸   XM_063274441
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063130512   ⟸   XM_063274442
- Peptide Label: isoform X5
Protein Domains
DAGKc   PH   Phorbol-ester/DAG-type   SAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZSZ6-F1-model_v2 AlphaFold D3ZSZ6 1-1210 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1561955 AgrOrtholog
BioCyc Gene G2FUF-13011 BioCyc
Ensembl Genes ENSRNOG00000010065 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000058079.5 UniProtKB/TrEMBL
  ENSRNOT00000097320.1 UniProtKB/TrEMBL
  ENSRNOT00000100616.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  2.60.200.40 UniProtKB/TrEMBL
  3.30.60.20 UniProtKB/TrEMBL
InterPro ATP-NAD_kinase_dom_1 UniProtKB/TrEMBL
  ATP-NAD_kinase_PpnK-typ UniProtKB/TrEMBL
  C1-like_sf UniProtKB/TrEMBL
  C1_DGKeta_rpt2 UniProtKB/TrEMBL
  DGK UniProtKB/TrEMBL
  Diacylglycerol_kin_accessory UniProtKB/TrEMBL
  Diacylglycerol_kinase_cat_dom UniProtKB/TrEMBL
  PH_like_dom UniProtKB/TrEMBL
  Pleckstrin_homology UniProtKB/TrEMBL
  Prot_Kinase_C-like_PE/DAG-bd UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed UniProtKB/TrEMBL
NCBI Gene 361076 ENTREZGENE
PANTHER DIACYLGLYCEROL KINASE ETA UniProtKB/TrEMBL
  PTHR11255 UniProtKB/TrEMBL
Pfam C1_1 UniProtKB/TrEMBL
  DAGK_acc UniProtKB/TrEMBL
  DAGK_cat UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
  SAM_2 UniProtKB/TrEMBL
PhenoGen Dgkh PhenoGen
PROSITE DAGK UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010065 RatGTEx
SMART DAGKa UniProtKB/TrEMBL
  DAGKc UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SM00109 UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SAM_homology UniProtKB/TrEMBL
  SSF111331 UniProtKB/TrEMBL
  SSF57889 UniProtKB/TrEMBL
UniProt A0A8I5ZJG9_RAT UniProtKB/TrEMBL
  A0A8I6A873_RAT UniProtKB/TrEMBL
  D3ZSZ6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-11 Dgkh  diacylglycerol kinase, eta  RGD1561955  similar to diacylglycerol kinase eta  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1561955  similar to diacylglycerol kinase eta   RGD1561955_predicted  similar to diacylglycerol kinase eta (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1561955_predicted  similar to diacylglycerol kinase eta (predicted)  LOC361076  similar to diacylglycerol kinase eta  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC361076  similar to diacylglycerol kinase eta      Symbol and Name status set to provisional 70820 PROVISIONAL